Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NCLP19338 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.61■□□□□ 0.57
NCLP19338 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NCLP19338 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 AC245100.5-201ENST00000452108 331 ntBASIC18.61■□□□□ 0.57
NCLP19338 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 AC074386.1-202ENST00000463561 864 ntBASIC18.61■□□□□ 0.57
NCLP19338 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.61■□□□□ 0.57
NCLP19338 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.61■□□□□ 0.57
NCLP19338 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.6■□□□□ 0.57
NCLP19338 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 AL589702.1-201ENST00000641229 1509 ntBASIC18.6■□□□□ 0.57
NCLP19338 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 LINC00528-201ENST00000600723 2160 ntBASIC18.6■□□□□ 0.57
NCLP19338 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.6■□□□□ 0.57
NCLP19338 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.6■□□□□ 0.57
NCLP19338 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
NCLP19338 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 AC109635.5-201ENST00000533593 962 ntBASIC18.6■□□□□ 0.57
NCLP19338 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCLP19338 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.6■□□□□ 0.57
NCLP19338 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
NCLP19338 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.6■□□□□ 0.57
NCLP19338 AL137784.3-201ENST00000623858 2288 ntBASIC18.6■□□□□ 0.57
NCLP19338 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NCLP19338 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NCLP19338 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 ELL2P1-201ENST00000413990 1906 ntBASIC18.59■□□□□ 0.57
NCLP19338 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NCLP19338 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 CTBP1-AS2-206ENST00000581398 5652 ntBASIC18.59■□□□□ 0.57
NCLP19338 LINC01101-201ENST00000622953 1884 ntBASIC18.59■□□□□ 0.57
NCLP19338 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.59■□□□□ 0.57
NCLP19338 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
NCLP19338 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.59■□□□□ 0.57
NCLP19338 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.59■□□□□ 0.57
NCLP19338 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.59■□□□□ 0.57
NCLP19338 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.59■□□□□ 0.57
NCLP19338 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.59■□□□□ 0.57
NCLP19338 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
NCLP19338 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCLP19338 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NCLP19338 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NCLP19338 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms