Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
ATP2A2P16615 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP2A2P16615 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A2P16615 MSTO2P-201ENST00000314835 1709 ntBASIC17.21■□□□□ 0.35
ATP2A2P16615 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ATP2A2P16615 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2A2P16615 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.21■□□□□ 0.34
ATP2A2P16615 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.21■□□□□ 0.34
ATP2A2P16615 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2A2P16615 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2A2P16615 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2A2P16615 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
ATP2A2P16615 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A2P16615 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 AC092364.2-201ENST00000596710 2692 ntBASIC17.2■□□□□ 0.34
ATP2A2P16615 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATP2A2P16615 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ATP2A2P16615 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 AC074338.1-201ENST00000416825 156 ntBASIC17.2■□□□□ 0.34
ATP2A2P16615 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A2P16615 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A2P16615 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A2P16615 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AP001063.1-201ENST00000568332 529 ntBASIC17.2■□□□□ 0.34
ATP2A2P16615 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A2P16615 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AL049840.4-201ENST00000602422 811 ntBASIC17.2■□□□□ 0.34
ATP2A2P16615 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A2P16615 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 PAUPAR-201ENST00000630360 2965 ntBASIC17.2■□□□□ 0.34
ATP2A2P16615 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AL691432.1-201ENST00000596308 1422 ntBASIC17.2■□□□□ 0.34
ATP2A2P16615 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A2P16615 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A2P16615 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATP2A2P16615 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ATP2A2P16615 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A2P16615 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A2P16615 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A2P16615 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A2P16615 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP2A2P16615 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A2P16615 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A2P16615 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A2P16615 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 TARDBPP1-201ENST00000442013 1203 ntBASIC17.19■□□□□ 0.34
ATP2A2P16615 EEF1DP4-201ENST00000446006 880 ntBASIC17.19■□□□□ 0.34
ATP2A2P16615 IGHJ2P-201ENST00000454480 60 ntBASIC17.19■□□□□ 0.34
ATP2A2P16615 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 FAM86HP-204ENST00000513466 959 ntBASIC17.19■□□□□ 0.34
ATP2A2P16615 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.19■□□□□ 0.34
ATP2A2P16615 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP2A2P16615 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A2P16615 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A2P16615 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP2A2P16615 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.19■□□□□ 0.34
ATP2A2P16615 AC106872.11-201ENST00000605838 421 ntBASIC17.19■□□□□ 0.34
ATP2A2P16615 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP2A2P16615 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP2A2P16615 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.19■□□□□ 0.34
ATP2A2P16615 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A2P16615 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms