Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
NCK1P16333 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.73□□□□□ -0.05
NCK1P16333 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
NCK1P16333 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.73□□□□□ -0.05
NCK1P16333 RARRES2P8-201ENST00000566335 367 ntBASIC14.73□□□□□ -0.05
NCK1P16333 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 AC027307.2-201ENST00000591252 911 ntBASIC14.73□□□□□ -0.05
NCK1P16333 AC064836.3-201ENST00000607928 673 ntBASIC14.73□□□□□ -0.05
NCK1P16333 AL031008.1-201ENST00000619963 541 ntBASIC14.73□□□□□ -0.05
NCK1P16333 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.73□□□□□ -0.05
NCK1P16333 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NCK1P16333 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NCK1P16333 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.73□□□□□ -0.05
NCK1P16333 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NCK1P16333 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 AC027601.5-201ENST00000624065 2482 ntBASIC14.72□□□□□ -0.05
NCK1P16333 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 AC002056.1-201ENST00000395613 760 ntBASIC14.72□□□□□ -0.05
NCK1P16333 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.72□□□□□ -0.05
NCK1P16333 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.72□□□□□ -0.05
NCK1P16333 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.72□□□□□ -0.05
NCK1P16333 Z83851.2-201ENST00000609564 659 ntBASIC14.72□□□□□ -0.05
NCK1P16333 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
NCK1P16333 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NCK1P16333 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.72□□□□□ -0.05
NCK1P16333 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.72□□□□□ -0.05
NCK1P16333 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.72□□□□□ -0.05
NCK1P16333 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NCK1P16333 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NCK1P16333 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCK1P16333 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NCK1P16333 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms