Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 BNIP3P42-201ENST00000454982 569 ntBASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 AC007551.1-201ENST00000457394 519 ntBASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 AC022137.2-201ENST00000503482 481 ntBASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 AC092658.1-201ENST00000505836 891 ntBASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 BNIP3P29-201ENST00000598302 571 ntBASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 AC011447.5-201ENST00000616168 564 ntBASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 AC093525.8-201ENST00000624099 1342 ntBASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB40ALP0C0E4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.07
RAB40ALP0C0E4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
RAB40ALP0C0E4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RAB40ALP0C0E4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AC018892.3-201ENST00000623986 2499 ntBASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AC016694.1-201ENST00000434179 700 ntBASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 RNA5SP412-201ENST00000516234 123 ntBASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AC079316.1-201ENST00000548397 411 ntBASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40ALP0C0E4 AL596087.1-201ENST00000400979 1969 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms