Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLTAP09496 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLTAP09496 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLTAP09496 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CLTAP09496 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CLTAP09496 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLTAP09496 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.01■□□□□ 0.31
CLTAP09496 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.01■□□□□ 0.31
CLTAP09496 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.01■□□□□ 0.31
CLTAP09496 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 CTBP2P3-201ENST00000585629 1255 ntBASIC17.01■□□□□ 0.31
CLTAP09496 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.01■□□□□ 0.31
CLTAP09496 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLTAP09496 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.01■□□□□ 0.31
CLTAP09496 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CLTAP09496 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17■□□□□ 0.31
CLTAP09496 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CLTAP09496 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLTAP09496 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17■□□□□ 0.31
CLTAP09496 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17■□□□□ 0.31
CLTAP09496 AP006294.1-201ENST00000415407 339 ntBASIC17■□□□□ 0.31
CLTAP09496 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CLTAP09496 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17■□□□□ 0.31
CLTAP09496 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CLTAP09496 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17■□□□□ 0.31
CLTAP09496 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17■□□□□ 0.31
CLTAP09496 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17■□□□□ 0.31
CLTAP09496 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17■□□□□ 0.31
CLTAP09496 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17■□□□□ 0.31
CLTAP09496 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLTAP09496 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17■□□□□ 0.31
CLTAP09496 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLTAP09496 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLTAP09496 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17■□□□□ 0.31
CLTAP09496 AC092127.1-201ENST00000567093 3455 ntBASIC17■□□□□ 0.31
CLTAP09496 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.99■□□□□ 0.31
CLTAP09496 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLTAP09496 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms