Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP2P08253 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
MMP2P08253 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
MMP2P08253 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
MMP2P08253 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 DGCR5-201ENST00000399539 862 ntBASIC15.56■□□□□ 0.08
MMP2P08253 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
MMP2P08253 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP2P08253 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 RPL13AP25-201ENST00000484130 612 ntBASIC15.56■□□□□ 0.08
MMP2P08253 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 WASH3P-207ENST00000560956 1394 ntBASIC15.56■□□□□ 0.08
MMP2P08253 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP2P08253 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MMP2P08253 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 ZBED1P1-201ENST00000502364 1930 ntBASIC15.56■□□□□ 0.08
MMP2P08253 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP2P08253 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP2P08253 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MMP2P08253 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP2P08253 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MMP2P08253 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP2P08253 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.55■□□□□ 0.08
MMP2P08253 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MMP2P08253 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.55■□□□□ 0.08
MMP2P08253 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MMP2P08253 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 KRT8P22-201ENST00000562317 1415 ntBASIC15.55■□□□□ 0.08
MMP2P08253 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.55■□□□□ 0.08
MMP2P08253 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
MMP2P08253 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP2P08253 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP2P08253 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP2P08253 AC004066.1-201ENST00000502488 802 ntBASIC15.55■□□□□ 0.08
MMP2P08253 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms