Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CTSDP07339 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CTSDP07339 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CTSDP07339 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CTSDP07339 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.94□□□□□ -0.34
CTSDP07339 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CTSDP07339 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 AC113367.3-201ENST00000508316 1912 ntBASIC12.94□□□□□ -0.34
CTSDP07339 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
CTSDP07339 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.94□□□□□ -0.34
CTSDP07339 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 AC098831.1-202ENST00000438821 336 ntBASIC12.94□□□□□ -0.34
CTSDP07339 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.94□□□□□ -0.34
CTSDP07339 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.94□□□□□ -0.34
CTSDP07339 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
CTSDP07339 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.94□□□□□ -0.34
CTSDP07339 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.94□□□□□ -0.34
CTSDP07339 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.94□□□□□ -0.34
CTSDP07339 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 AC117489.1-201ENST00000625169 3217 ntBASIC12.94□□□□□ -0.34
CTSDP07339 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CTSDP07339 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.94□□□□□ -0.34
CTSDP07339 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CTSDP07339 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.94□□□□□ -0.34
CTSDP07339 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 AC025580.3-201ENST00000617932 1424 ntBASIC12.94□□□□□ -0.34
CTSDP07339 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.94□□□□□ -0.34
CTSDP07339 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 AL607033.1-201ENST00000623900 1599 ntBASIC12.94□□□□□ -0.34
CTSDP07339 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.94□□□□□ -0.34
CTSDP07339 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CTSDP07339 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.94□□□□□ -0.34
CTSDP07339 AC027601.5-201ENST00000624065 2482 ntBASIC12.94□□□□□ -0.34
CTSDP07339 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CTSDP07339 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CTSDP07339 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms