Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GIMAP3P-201ENST00000495150 836 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 HILS1-202ENST00000545329 423 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 AC023310.3-201ENST00000557027 670 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 AC100756.1-201ENST00000562736 682 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 AC138749.3-201ENST00000567691 622 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 AC116165.1-201ENST00000611806 668 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT4O95628 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 AL133267.1-201ENST00000398220 340 ntBASIC13.87□□□□□ -0.19
CNOT4O95628 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT4O95628 AC022494.1-201ENST00000466044 728 ntBASIC13.87□□□□□ -0.19
CNOT4O95628 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 RPL13AP25-201ENST00000484130 612 ntBASIC13.87□□□□□ -0.19
CNOT4O95628 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 AC104596.2-201ENST00000512793 793 ntBASIC13.87□□□□□ -0.19
CNOT4O95628 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT4O95628 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
CNOT4O95628 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT4O95628 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CNOT4O95628 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.87□□□□□ -0.19
CNOT4O95628 AC017083.2-201ENST00000608069 979 ntBASIC13.87□□□□□ -0.19
CNOT4O95628 MIR6799-201ENST00000620297 69 ntBASIC13.87□□□□□ -0.19
CNOT4O95628 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CNOT4O95628 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT4O95628 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.87□□□□□ -0.19
CNOT4O95628 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CNOT4O95628 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.87□□□□□ -0.19
CNOT4O95628 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.86□□□□□ -0.19
CNOT4O95628 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CNOT4O95628 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CNOT4O95628 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.86□□□□□ -0.19
CNOT4O95628 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CNOT4O95628 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CNOT4O95628 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CNOT4O95628 AP006294.1-201ENST00000415407 339 ntBASIC13.86□□□□□ -0.19
CNOT4O95628 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 332.9 ms