Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SIX6O95475 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.06□□□□□ -0.32
SIX6O95475 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 MIR4321-201ENST00000592276 80 ntBASIC13.06□□□□□ -0.32
SIX6O95475 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 AC021097.1-201ENST00000607902 574 ntBASIC13.06□□□□□ -0.32
SIX6O95475 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SIX6O95475 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SIX6O95475 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.06□□□□□ -0.32
SIX6O95475 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.06□□□□□ -0.32
SIX6O95475 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SIX6O95475 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.05□□□□□ -0.32
SIX6O95475 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SIX6O95475 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SIX6O95475 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SIX6O95475 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.05□□□□□ -0.32
SIX6O95475 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SIX6O95475 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
SIX6O95475 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
SIX6O95475 TERF1P1-201ENST00000311003 1181 ntBASIC13.05□□□□□ -0.32
SIX6O95475 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.05□□□□□ -0.32
SIX6O95475 AK4P3-201ENST00000418260 669 ntBASIC13.05□□□□□ -0.32
SIX6O95475 AL671277.2-201ENST00000458060 996 ntBASIC13.05□□□□□ -0.32
SIX6O95475 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.05□□□□□ -0.32
SIX6O95475 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 AP002469.2-201ENST00000531724 424 ntBASIC13.05□□□□□ -0.32
SIX6O95475 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms