Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 KRT8P44-201ENST00000441609 1350 ntBASIC16.22■□□□□ 0.19
BEST1O76090 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.22■□□□□ 0.19
BEST1O76090 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 AC018665.1-201ENST00000622927 1362 ntBASIC16.22■□□□□ 0.19
BEST1O76090 AL158070.2-201ENST00000623713 1621 ntBASIC16.22■□□□□ 0.19
BEST1O76090 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
BEST1O76090 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.21■□□□□ 0.19
BEST1O76090 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.21■□□□□ 0.19
BEST1O76090 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.21■□□□□ 0.19
BEST1O76090 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
BEST1O76090 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.21■□□□□ 0.19
BEST1O76090 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.21■□□□□ 0.19
BEST1O76090 AC148477.4-201ENST00000613430 1793 ntBASIC16.21■□□□□ 0.19
BEST1O76090 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 GK-202ENST00000378941 458 ntTSL 3 BASIC16.21■□□□□ 0.19
BEST1O76090 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.21■□□□□ 0.19
BEST1O76090 AC104457.1-201ENST00000401024 814 ntBASIC16.21■□□□□ 0.19
BEST1O76090 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.21■□□□□ 0.19
BEST1O76090 AC004066.1-201ENST00000502488 802 ntBASIC16.21■□□□□ 0.19
BEST1O76090 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.21■□□□□ 0.19
BEST1O76090 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.21■□□□□ 0.19
BEST1O76090 AC106886.1-201ENST00000568660 600 ntBASIC16.21■□□□□ 0.19
BEST1O76090 AC009486.1-201ENST00000569860 813 ntBASIC16.21■□□□□ 0.19
BEST1O76090 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.21■□□□□ 0.19
BEST1O76090 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.21■□□□□ 0.19
BEST1O76090 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.21■□□□□ 0.19
BEST1O76090 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BEST1O76090 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.21■□□□□ 0.18
BEST1O76090 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BEST1O76090 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BEST1O76090 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BEST1O76090 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BEST1O76090 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BEST1O76090 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 AC023024.2-201ENST00000623561 1993 ntBASIC16.2■□□□□ 0.18
BEST1O76090 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 AC138035.3-201ENST00000622706 2791 ntBASIC16.2■□□□□ 0.18
BEST1O76090 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 OR8S1-201ENST00000310194 1080 ntBASIC16.2■□□□□ 0.18
BEST1O76090 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.2■□□□□ 0.18
BEST1O76090 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.2■□□□□ 0.18
BEST1O76090 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.2■□□□□ 0.18
BEST1O76090 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.2■□□□□ 0.18
BEST1O76090 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.2■□□□□ 0.18
BEST1O76090 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 AL512343.1-201ENST00000605837 169 ntBASIC16.2■□□□□ 0.18
BEST1O76090 AP005019.2-201ENST00000615104 511 ntBASIC16.2■□□□□ 0.18
BEST1O76090 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms