Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
OPHN1O60890 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.3■□□□□ 0.2
OPHN1O60890 CETN4P-206ENST00000642099 2168 ntBASIC16.3■□□□□ 0.2
OPHN1O60890 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.3■□□□□ 0.2
OPHN1O60890 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
OPHN1O60890 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.29■□□□□ 0.2
OPHN1O60890 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.29■□□□□ 0.2
OPHN1O60890 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.29■□□□□ 0.2
OPHN1O60890 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
OPHN1O60890 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
OPHN1O60890 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.29■□□□□ 0.2
OPHN1O60890 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.29■□□□□ 0.2
OPHN1O60890 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
OPHN1O60890 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.29■□□□□ 0.2
OPHN1O60890 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.29■□□□□ 0.2
OPHN1O60890 MIR4313-201ENST00000580760 101 ntBASIC16.29■□□□□ 0.2
OPHN1O60890 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 AL450472.2-201ENST00000603663 1156 ntBASIC16.29■□□□□ 0.2
OPHN1O60890 MIR6799-201ENST00000620297 69 ntBASIC16.29■□□□□ 0.2
OPHN1O60890 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.29■□□□□ 0.2
OPHN1O60890 AC105250.1-201ENST00000509378 2057 ntBASIC16.29■□□□□ 0.2
OPHN1O60890 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 PPT1-215ENST00000641471 2368 ntBASIC16.29■□□□□ 0.2
OPHN1O60890 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.29■□□□□ 0.2
OPHN1O60890 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
OPHN1O60890 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.29■□□□□ 0.2
OPHN1O60890 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.29■□□□□ 0.2
OPHN1O60890 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OPHN1O60890 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 OR2I1P-210ENST00000642037 4691 ntBASIC16.28■□□□□ 0.2
OPHN1O60890 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.28■□□□□ 0.2
OPHN1O60890 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.28■□□□□ 0.2
OPHN1O60890 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 AC136621.1-201ENST00000624017 2304 ntBASIC16.28■□□□□ 0.2
OPHN1O60890 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.28■□□□□ 0.2
OPHN1O60890 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
OPHN1O60890 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.28■□□□□ 0.2
OPHN1O60890 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.28■□□□□ 0.2
OPHN1O60890 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.28■□□□□ 0.2
OPHN1O60890 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
OPHN1O60890 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.28■□□□□ 0.2
OPHN1O60890 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.28■□□□□ 0.2
OPHN1O60890 API5-211ENST00000534695 560 ntTSL 5 BASIC16.28■□□□□ 0.2
OPHN1O60890 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.28■□□□□ 0.2
OPHN1O60890 AL589739.1-201ENST00000607720 493 ntBASIC16.28■□□□□ 0.2
OPHN1O60890 AC008738.7-201ENST00000609744 511 ntBASIC16.28■□□□□ 0.2
OPHN1O60890 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.28■□□□□ 0.2
OPHN1O60890 AC087481.3-201ENST00000602886 1894 ntBASIC16.28■□□□□ 0.2
OPHN1O60890 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
OPHN1O60890 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.28■□□□□ 0.2
OPHN1O60890 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.28■□□□□ 0.2
OPHN1O60890 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
OPHN1O60890 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.28■□□□□ 0.2
OPHN1O60890 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OPHN1O60890 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms