Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.84□□□□□ -0.19
TRAF3IP2O43734 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 DOC2GP-202ENST00000514950 1163 ntBASIC13.84□□□□□ -0.19
TRAF3IP2O43734 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 AJ011932.1-201ENST00000621707 465 ntBASIC13.84□□□□□ -0.19
TRAF3IP2O43734 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 CICP11-201ENST00000434745 2827 ntBASIC13.84□□□□□ -0.19
TRAF3IP2O43734 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF3IP2O43734 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF3IP2O43734 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAF3IP2O43734 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.83□□□□□ -0.19
TRAF3IP2O43734 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF3IP2O43734 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF3IP2O43734 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.83□□□□□ -0.19
TRAF3IP2O43734 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 AC091951.1-201ENST00000512854 2465 ntBASIC13.83□□□□□ -0.2
TRAF3IP2O43734 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 CLK3P2-201ENST00000427566 1453 ntBASIC13.83□□□□□ -0.2
TRAF3IP2O43734 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
TRAF3IP2O43734 AC023310.3-201ENST00000557027 670 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms