Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC24.21■■□□□ 1.47
CHD1O14646 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC24.21■■□□□ 1.47
CHD1O14646 ERP29P1-201ENST00000442902 706 ntBASIC24.21■■□□□ 1.47
CHD1O14646 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC24.21■■□□□ 1.47
CHD1O14646 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHD1O14646 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHD1O14646 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHD1O14646 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHD1O14646 AC025183.3-201ENST00000623526 1482 ntBASIC24.2■■□□□ 1.46
CHD1O14646 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC24.2■■□□□ 1.46
CHD1O14646 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC24.2■■□□□ 1.46
CHD1O14646 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 MIR566-201ENST00000385187 94 ntBASIC24.2■■□□□ 1.46
CHD1O14646 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC24.2■■□□□ 1.46
CHD1O14646 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC24.2■■□□□ 1.46
CHD1O14646 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC24.2■■□□□ 1.46
CHD1O14646 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CHD1O14646 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC24.2■■□□□ 1.46
CHD1O14646 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC24.2■■□□□ 1.46
CHD1O14646 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHD1O14646 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD1O14646 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 NEFHP1-201ENST00000412845 2629 ntBASIC24.19■■□□□ 1.46
CHD1O14646 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD1O14646 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 KRT17P5-201ENST00000332088 839 ntBASIC24.19■■□□□ 1.46
CHD1O14646 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC24.19■■□□□ 1.46
CHD1O14646 PMEL-214ENST00000550447 901 ntTSL 3 BASIC24.19■■□□□ 1.46
CHD1O14646 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC24.19■■□□□ 1.46
CHD1O14646 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD1O14646 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC24.19■■□□□ 1.46
CHD1O14646 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
CHD1O14646 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD1O14646 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD1O14646 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CHD1O14646 AC023141.7-201ENST00000430646 407 ntBASIC24.18■■□□□ 1.46
CHD1O14646 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC24.18■■□□□ 1.46
CHD1O14646 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC24.18■■□□□ 1.46
CHD1O14646 RGS5-216ENST00000449680 788 ntTSL 3 BASIC24.18■■□□□ 1.46
CHD1O14646 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC24.18■■□□□ 1.46
CHD1O14646 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD1O14646 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CHD1O14646 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CHD1O14646 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC24.18■■□□□ 1.46
CHD1O14646 AC140113.1-201ENST00000603467 169 ntBASIC24.18■■□□□ 1.46
CHD1O14646 AL118522.1-201ENST00000611368 560 ntBASIC24.18■■□□□ 1.46
CHD1O14646 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC24.18■■□□□ 1.46
CHD1O14646 AC006449.5-201ENST00000610658 2098 ntBASIC24.18■■□□□ 1.46
CHD1O14646 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CHD1O14646 CTBP2P8-201ENST00000422584 1330 ntBASIC24.18■■□□□ 1.46
CHD1O14646 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 AP001094.4-201ENST00000579008 2176 ntBASIC24.18■■□□□ 1.46
CHD1O14646 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
CHD1O14646 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CHD1O14646 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD1O14646 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC24.18■■□□□ 1.46
CHD1O14646 AC068867.1-201ENST00000559855 150 ntBASIC24.18■■□□□ 1.46
CHD1O14646 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC24.18■■□□□ 1.46
CHD1O14646 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC24.18■■□□□ 1.46
CHD1O14646 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD1O14646 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD1O14646 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CHD1O14646 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CHD1O14646 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHD1O14646 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD1O14646 AC003102.2-201ENST00000589195 1469 ntBASIC24.17■■□□□ 1.46
CHD1O14646 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms