Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 OR2I1P-210ENST00000642037 4691 ntBASIC15.73■□□□□ 0.11
AP3B1O00203 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.73■□□□□ 0.11
AP3B1O00203 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
AP3B1O00203 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.73■□□□□ 0.11
AP3B1O00203 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.73■□□□□ 0.11
AP3B1O00203 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.73■□□□□ 0.11
AP3B1O00203 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.73■□□□□ 0.11
AP3B1O00203 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
AP3B1O00203 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.73■□□□□ 0.11
AP3B1O00203 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.73■□□□□ 0.11
AP3B1O00203 AC004449.1-201ENST00000564240 433 ntBASIC15.73■□□□□ 0.11
AP3B1O00203 AC051619.7-201ENST00000568314 623 ntBASIC15.73■□□□□ 0.11
AP3B1O00203 AL138828.2-201ENST00000615812 383 ntBASIC15.73■□□□□ 0.11
AP3B1O00203 SPDYE12P-201ENST00000618416 771 ntBASIC15.73■□□□□ 0.11
AP3B1O00203 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP3B1O00203 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 MIR1233-2-201ENST00000408138 82 ntBASIC15.72■□□□□ 0.11
AP3B1O00203 MIR1233-1-201ENST00000408722 82 ntBASIC15.72■□□□□ 0.11
AP3B1O00203 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 AC109322.1-201ENST00000524499 1264 ntBASIC15.72■□□□□ 0.11
AP3B1O00203 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 AC010336.2-201ENST00000564226 506 ntBASIC15.72■□□□□ 0.11
AP3B1O00203 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.72■□□□□ 0.11
AP3B1O00203 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
AP3B1O00203 Z92544.3-201ENST00000624747 417 ntBASIC15.72■□□□□ 0.11
AP3B1O00203 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.72■□□□□ 0.11
AP3B1O00203 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
AP3B1O00203 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.72■□□□□ 0.11
AP3B1O00203 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.72■□□□□ 0.11
AP3B1O00203 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
AP3B1O00203 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3B1O00203 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 AC013726.1-201ENST00000563747 2285 ntBASIC15.71■□□□□ 0.11
AP3B1O00203 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms