Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 AL162726.2-201ENST00000438986 1017 ntBASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 HNRNPUP1-201ENST00000554987 333 ntBASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA3F8WFD2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 TOMM22P5-201ENST00000416399 439 ntBASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 AL359711.2-201ENST00000563105 872 ntBASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 AL607033.1-201ENST00000623900 1599 ntBASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA3F8WFD2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms