Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 GOLGA2P4-201ENST00000441462 777 ntBASIC13.52□□□□□ -0.25
MBD3L3A6NE82 CNN2P10-201ENST00000443067 918 ntBASIC13.52□□□□□ -0.25
MBD3L3A6NE82 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 C2orf69P2-201ENST00000562032 1123 ntBASIC13.52□□□□□ -0.25
MBD3L3A6NE82 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 LINC02199-201ENST00000506655 2702 ntBASIC13.52□□□□□ -0.25
MBD3L3A6NE82 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L3A6NE82 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 KRT8P44-201ENST00000441609 1350 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 BTBD6P1-201ENST00000412176 1267 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 POM121L8P-201ENST00000417732 1281 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 HLA-K-203ENST00000430151 1046 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 FAM8A4P-201ENST00000435433 1213 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 POM121L9P-203ENST00000441984 1285 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 HOMER2P2-201ENST00000451621 847 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 DUX4L47-201ENST00000566374 394 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 MIR4741-201ENST00000579822 90 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 MIR6787-201ENST00000616675 61 ntBASIC13.51□□□□□ -0.25
MBD3L3A6NE82 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L3A6NE82 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 AC099398.1-201ENST00000567919 2776 ntBASIC13.5□□□□□ -0.25
MBD3L3A6NE82 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.5□□□□□ -0.25
MBD3L3A6NE82 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 AC015818.8-201ENST00000587907 1519 ntBASIC13.5□□□□□ -0.25
MBD3L3A6NE82 DOC2GP-204ENST00000639052 2548 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms