Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC00554-201ENST00000564841 3011 ntBASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 HLA-K-203ENST00000430151 1046 ntBASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 BX539320.1-201ENST00000623759 877 ntBASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC005252.2-201ENST00000624630 1141 ntBASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC025048.6-201ENST00000634326 1161 ntBASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-4A0A0C4DH59 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 ACE3P-201ENST00000423435 1973 ntBASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL162726.2-201ENST00000438986 1017 ntBASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 CLUHP6-201ENST00000580789 941 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms