Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HRH3Q9Y5N1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HRH3Q9Y5N1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
HRH3Q9Y5N1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HRH3Q9Y5N1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 MIR4281-201ENST00000580852 62 ntBASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.38■■□□□ 1.01
HRH3Q9Y5N1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 AC022211.4-201ENST00000625094 2161 ntBASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 UNC93B8-201ENST00000511903 705 ntBASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.37■■□□□ 1.01
HRH3Q9Y5N1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 BX664725.1-201ENST00000438252 379 ntBASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HRH3Q9Y5N1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 KRT125P-201ENST00000546827 989 ntBASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 AC137630.3-201ENST00000607245 391 ntBASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HRH3Q9Y5N1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 MIR6089-201ENST00000616698 64 ntBASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 AC090877.2-201ENST00000558441 1738 ntBASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HRH3Q9Y5N1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HRH3Q9Y5N1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HRH3Q9Y5N1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
HRH3Q9Y5N1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.33■■□□□ 1.01
HRH3Q9Y5N1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
HRH3Q9Y5N1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.32■■□□□ 1
HRH3Q9Y5N1 AC138932.3-201ENST00000567634 1902 ntBASIC21.32■■□□□ 1
HRH3Q9Y5N1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HRH3Q9Y5N1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HRH3Q9Y5N1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HRH3Q9Y5N1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HRH3Q9Y5N1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 AC011551.1-201ENST00000614101 683 ntBASIC21.32■■□□□ 1
HRH3Q9Y5N1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HRH3Q9Y5N1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.32■■□□□ 1
HRH3Q9Y5N1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.31■■□□□ 1
HRH3Q9Y5N1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HRH3Q9Y5N1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.31■■□□□ 1
HRH3Q9Y5N1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.31■■□□□ 1
HRH3Q9Y5N1 AC021242.3-201ENST00000607598 1377 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms