Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGB1Q9Y5G3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB1Q9Y5G3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB1Q9Y5G3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB1Q9Y5G3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 DUX4L11-201ENST00000611504 1267 ntBASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 DUX4L12-201ENST00000614593 1267 ntBASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 DUX4L14-201ENST00000621227 1267 ntBASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB1Q9Y5G3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB1Q9Y5G3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 MIR6089-201ENST00000616698 64 ntBASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB1Q9Y5G3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGB1Q9Y5G3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHGB1Q9Y5G3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB1Q9Y5G3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.14■□□□□ 0.98
PCDHGB1Q9Y5G3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGB1Q9Y5G3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
PCDHGB1Q9Y5G3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGB1Q9Y5G3 CR559946.2-201ENST00000623684 991 ntBASIC21.14■□□□□ 0.97
PCDHGB1Q9Y5G3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB1Q9Y5G3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGB1Q9Y5G3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB1Q9Y5G3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB1Q9Y5G3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHGB1Q9Y5G3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 AC137767.1-201ENST00000602918 1920 ntBASIC21.12■□□□□ 0.97
PCDHGB1Q9Y5G3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB1Q9Y5G3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGB1Q9Y5G3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB1Q9Y5G3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB1Q9Y5G3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB1Q9Y5G3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB1Q9Y5G3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB1Q9Y5G3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms