Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 HLA-L-211ENST00000482052 1765 ntBASIC22.61■■□□□ 1.21
RNF11Q9Y3C5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF11Q9Y3C5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 AC079834.2-201ENST00000609776 1949 ntBASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 AC141586.4-201ENST00000624558 1573 ntBASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF11Q9Y3C5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF11Q9Y3C5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF11Q9Y3C5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF11Q9Y3C5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
RNF11Q9Y3C5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF11Q9Y3C5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF11Q9Y3C5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF11Q9Y3C5 ABHD17AP5-201ENST00000580133 923 ntBASIC22.56■■□□□ 1.2
RNF11Q9Y3C5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF11Q9Y3C5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF11Q9Y3C5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF11Q9Y3C5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF11Q9Y3C5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF11Q9Y3C5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF11Q9Y3C5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF11Q9Y3C5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF11Q9Y3C5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 AC004812.2-201ENST00000611079 2094 ntBASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF11Q9Y3C5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RNF11Q9Y3C5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 NTF6A-201ENST00000591175 560 ntBASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF11Q9Y3C5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF11Q9Y3C5 CLDN5-201ENST00000403084 2357 ntBASIC22.5■■□□□ 1.19
RNF11Q9Y3C5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF11Q9Y3C5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF11Q9Y3C5 LONRF2P2-201ENST00000439212 571 ntBASIC22.5■■□□□ 1.19
RNF11Q9Y3C5 DUX4L18-201ENST00000553347 1267 ntBASIC22.5■■□□□ 1.19
RNF11Q9Y3C5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF11Q9Y3C5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF11Q9Y3C5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms