Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
UBQLN2Q9UHD9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN2Q9UHD9 ABHD17AP4-201ENST00000411545 909 ntBASIC19.47■□□□□ 0.71
UBQLN2Q9UHD9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.47■□□□□ 0.71
UBQLN2Q9UHD9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN2Q9UHD9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN2Q9UHD9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN2Q9UHD9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN2Q9UHD9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN2Q9UHD9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN2Q9UHD9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 FOXO3B-201ENST00000395675 1928 ntBASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 AC004812.2-201ENST00000611079 2094 ntBASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN2Q9UHD9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 DUSP8P3-201ENST00000399571 1760 ntBASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UBQLN2Q9UHD9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 ZNRF2P2-203ENST00000454624 420 ntBASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN2Q9UHD9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UBQLN2Q9UHD9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBQLN2Q9UHD9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN2Q9UHD9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN2Q9UHD9 AL137060.1-201ENST00000618151 2648 ntBASIC19.39■□□□□ 0.69
UBQLN2Q9UHD9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms