Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL20A1Q9P218 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL20A1Q9P218 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL20A1Q9P218 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
COL20A1Q9P218 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL20A1Q9P218 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.52■■□□□ 1.84
COL20A1Q9P218 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL20A1Q9P218 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.52■■□□□ 1.84
COL20A1Q9P218 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.52■■□□□ 1.84
COL20A1Q9P218 MIR6089-201ENST00000616698 64 ntBASIC26.52■■□□□ 1.84
COL20A1Q9P218 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL20A1Q9P218 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.51■■□□□ 1.83
COL20A1Q9P218 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
COL20A1Q9P218 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.51■■□□□ 1.83
COL20A1Q9P218 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.51■■□□□ 1.83
COL20A1Q9P218 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.51■■□□□ 1.83
COL20A1Q9P218 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.51■■□□□ 1.83
COL20A1Q9P218 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
COL20A1Q9P218 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
COL20A1Q9P218 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
COL20A1Q9P218 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL20A1Q9P218 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL20A1Q9P218 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL20A1Q9P218 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.49■■□□□ 1.83
COL20A1Q9P218 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.49■■□□□ 1.83
COL20A1Q9P218 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.49■■□□□ 1.83
COL20A1Q9P218 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL20A1Q9P218 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL20A1Q9P218 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.48■■□□□ 1.83
COL20A1Q9P218 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.48■■□□□ 1.83
COL20A1Q9P218 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL20A1Q9P218 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL20A1Q9P218 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL20A1Q9P218 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.47■■□□□ 1.83
COL20A1Q9P218 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL20A1Q9P218 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.47■■□□□ 1.83
COL20A1Q9P218 MIR6722-201ENST00000617286 78 ntBASIC26.47■■□□□ 1.83
COL20A1Q9P218 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL20A1Q9P218 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL20A1Q9P218 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.47■■□□□ 1.83
COL20A1Q9P218 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL20A1Q9P218 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.46■■□□□ 1.83
COL20A1Q9P218 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
COL20A1Q9P218 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL20A1Q9P218 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.46■■□□□ 1.83
COL20A1Q9P218 MIR4466-201ENST00000606121 54 ntBASIC26.46■■□□□ 1.83
COL20A1Q9P218 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.46■■□□□ 1.83
COL20A1Q9P218 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.46■■□□□ 1.83
COL20A1Q9P218 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.46■■□□□ 1.83
COL20A1Q9P218 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL20A1Q9P218 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.46■■□□□ 1.83
COL20A1Q9P218 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
COL20A1Q9P218 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL20A1Q9P218 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.45■■□□□ 1.82
COL20A1Q9P218 AL512631.2-201ENST00000604634 923 ntBASIC26.45■■□□□ 1.82
COL20A1Q9P218 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.45■■□□□ 1.82
COL20A1Q9P218 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL20A1Q9P218 AC131274.2-201ENST00000580697 1507 ntBASIC26.44■■□□□ 1.82
COL20A1Q9P218 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.44■■□□□ 1.82
COL20A1Q9P218 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.44■■□□□ 1.82
COL20A1Q9P218 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL20A1Q9P218 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.44■■□□□ 1.82
COL20A1Q9P218 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL20A1Q9P218 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.44■■□□□ 1.82
COL20A1Q9P218 AC004448.1-201ENST00000458332 883 ntBASIC26.44■■□□□ 1.82
COL20A1Q9P218 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.44■■□□□ 1.82
COL20A1Q9P218 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
COL20A1Q9P218 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL20A1Q9P218 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.43■■□□□ 1.82
COL20A1Q9P218 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.43■■□□□ 1.82
COL20A1Q9P218 AL356740.2-201ENST00000601559 647 ntBASIC26.43■■□□□ 1.82
COL20A1Q9P218 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.43■■□□□ 1.82
COL20A1Q9P218 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL20A1Q9P218 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.42■■□□□ 1.82
COL20A1Q9P218 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
COL20A1Q9P218 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL20A1Q9P218 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL20A1Q9P218 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.42■■□□□ 1.82
COL20A1Q9P218 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL20A1Q9P218 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL20A1Q9P218 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL20A1Q9P218 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL20A1Q9P218 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL20A1Q9P218 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL20A1Q9P218 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.41■■□□□ 1.82
COL20A1Q9P218 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
COL20A1Q9P218 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL20A1Q9P218 AL136116.3-201ENST00000402907 1138 ntBASIC26.4■■□□□ 1.82
COL20A1Q9P218 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
COL20A1Q9P218 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.4■■□□□ 1.82
COL20A1Q9P218 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.4■■□□□ 1.82
COL20A1Q9P218 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL20A1Q9P218 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms