Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
MINDY3Q9H8M7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.51■■□□□ 1.67
MINDY3Q9H8M7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MINDY3Q9H8M7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
MINDY3Q9H8M7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.5■■□□□ 1.67
MINDY3Q9H8M7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.5■■□□□ 1.67
MINDY3Q9H8M7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 MIR6724-1-201ENST00000616420 92 ntBASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 MIR6724-2-201ENST00000616483 92 ntBASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 MIR6724-4-201ENST00000617390 92 ntBASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 MIR6724-3-201ENST00000622482 92 ntBASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
MINDY3Q9H8M7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 AL117332.1-201ENST00000622628 974 ntBASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MINDY3Q9H8M7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MINDY3Q9H8M7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MINDY3Q9H8M7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.47■■□□□ 1.67
MINDY3Q9H8M7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.47■■□□□ 1.67
MINDY3Q9H8M7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.47■■□□□ 1.67
MINDY3Q9H8M7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MINDY3Q9H8M7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MINDY3Q9H8M7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MINDY3Q9H8M7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
MINDY3Q9H8M7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.46■■□□□ 1.67
MINDY3Q9H8M7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.46■■□□□ 1.67
MINDY3Q9H8M7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
MINDY3Q9H8M7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
MINDY3Q9H8M7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MINDY3Q9H8M7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 MIR3621-201ENST00000580529 85 ntBASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
MINDY3Q9H8M7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 AC008406.3-201ENST00000620001 1374 ntBASIC25.43■■□□□ 1.66
MINDY3Q9H8M7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 AC131281.2-201ENST00000520478 145 ntBASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 AC131274.2-201ENST00000580697 1507 ntBASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MINDY3Q9H8M7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 AC004448.1-201ENST00000458332 883 ntBASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 MIR6722-201ENST00000617286 78 ntBASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 AC022211.4-201ENST00000625094 2161 ntBASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
MINDY3Q9H8M7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MINDY3Q9H8M7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.4■■□□□ 1.66
MINDY3Q9H8M7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
MINDY3Q9H8M7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MINDY3Q9H8M7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms