Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 ABCB10P4-201ENST00000566803 2184 ntBASIC21.5■■□□□ 1.03
SLC38A1Q9H2H9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC38A1Q9H2H9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC38A1Q9H2H9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 DUX4L18-201ENST00000553347 1267 ntBASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC38A1Q9H2H9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC38A1Q9H2H9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC38A1Q9H2H9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC38A1Q9H2H9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
SLC38A1Q9H2H9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC38A1Q9H2H9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC38A1Q9H2H9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.44■■□□□ 1.02
SLC38A1Q9H2H9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 AC019171.1-201ENST00000601251 1056 ntBASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SLC38A1Q9H2H9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC38A1Q9H2H9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC38A1Q9H2H9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC38A1Q9H2H9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC38A1Q9H2H9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC38A1Q9H2H9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC38A1Q9H2H9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC38A1Q9H2H9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 AC004987.1-201ENST00000428627 508 ntBASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 ATP5G2P3-201ENST00000429083 425 ntBASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 AC139795.1-202ENST00000500444 432 ntBASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC38A1Q9H2H9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC38A1Q9H2H9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC38A1Q9H2H9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC38A1Q9H2H9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.4■■□□□ 1.02
SLC38A1Q9H2H9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms