Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS11Q9H270 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS11Q9H270 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
VPS11Q9H270 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS11Q9H270 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
VPS11Q9H270 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.28■■□□□ 1.32
VPS11Q9H270 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
VPS11Q9H270 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS11Q9H270 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS11Q9H270 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
VPS11Q9H270 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS11Q9H270 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS11Q9H270 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
VPS11Q9H270 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS11Q9H270 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS11Q9H270 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS11Q9H270 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.31
VPS11Q9H270 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS11Q9H270 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.26■■□□□ 1.31
VPS11Q9H270 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS11Q9H270 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.26■■□□□ 1.31
VPS11Q9H270 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.26■■□□□ 1.31
VPS11Q9H270 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS11Q9H270 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
VPS11Q9H270 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS11Q9H270 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS11Q9H270 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS11Q9H270 HLA-L-211ENST00000482052 1765 ntBASIC23.24■■□□□ 1.31
VPS11Q9H270 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS11Q9H270 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS11Q9H270 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS11Q9H270 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS11Q9H270 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.24■■□□□ 1.31
VPS11Q9H270 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS11Q9H270 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS11Q9H270 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.23■■□□□ 1.31
VPS11Q9H270 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS11Q9H270 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS11Q9H270 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS11Q9H270 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS11Q9H270 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS11Q9H270 RAP2CP1-202ENST00000605179 643 ntBASIC23.23■■□□□ 1.31
VPS11Q9H270 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS11Q9H270 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS11Q9H270 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
VPS11Q9H270 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS11Q9H270 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
VPS11Q9H270 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS11Q9H270 FOXO3B-201ENST00000395675 1928 ntBASIC23.22■■□□□ 1.31
VPS11Q9H270 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS11Q9H270 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS11Q9H270 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
VPS11Q9H270 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS11Q9H270 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.21■■□□□ 1.31
VPS11Q9H270 AC026202.3-201ENST00000600805 1127 ntBASIC23.21■■□□□ 1.31
VPS11Q9H270 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS11Q9H270 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS11Q9H270 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS11Q9H270 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS11Q9H270 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
VPS11Q9H270 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS11Q9H270 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS11Q9H270 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS11Q9H270 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS11Q9H270 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS11Q9H270 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS11Q9H270 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS11Q9H270 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
VPS11Q9H270 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS11Q9H270 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
VPS11Q9H270 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS11Q9H270 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS11Q9H270 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
VPS11Q9H270 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS11Q9H270 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.19■■□□□ 1.3
VPS11Q9H270 GPX1-201ENST00000419349 1106 ntBASIC23.19■■□□□ 1.3
VPS11Q9H270 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS11Q9H270 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.19■■□□□ 1.3
VPS11Q9H270 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS11Q9H270 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS11Q9H270 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS11Q9H270 C9orf163-202ENST00000624034 2573 ntBASIC23.18■■□□□ 1.3
VPS11Q9H270 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
VPS11Q9H270 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
VPS11Q9H270 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.18■■□□□ 1.3
VPS11Q9H270 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS11Q9H270 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS11Q9H270 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS11Q9H270 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.18■■□□□ 1.3
VPS11Q9H270 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS11Q9H270 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS11Q9H270 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS11Q9H270 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VPS11Q9H270 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS11Q9H270 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS11Q9H270 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS11Q9H270 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS11Q9H270 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS11Q9H270 KRT18P10-201ENST00000388836 1287 ntBASIC23.16■■□□□ 1.3
VPS11Q9H270 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms