Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 DUSP8P5-201ENST00000422884 1815 ntBASIC23.2■■□□□ 1.3
CPNE1Q99829 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
CPNE1Q99829 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.2■■□□□ 1.3
CPNE1Q99829 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CPNE1Q99829 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE1Q99829 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.19■■□□□ 1.3
CPNE1Q99829 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE1Q99829 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CPNE1Q99829 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.19■■□□□ 1.3
CPNE1Q99829 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE1Q99829 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.19■■□□□ 1.3
CPNE1Q99829 AC018755.3-202ENST00000596210 929 ntBASIC23.19■■□□□ 1.3
CPNE1Q99829 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.18■■□□□ 1.3
CPNE1Q99829 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE1Q99829 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE1Q99829 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.18■■□□□ 1.3
CPNE1Q99829 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE1Q99829 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE1Q99829 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE1Q99829 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.17■■□□□ 1.3
CPNE1Q99829 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 AL592293.1-201ENST00000502889 1188 ntBASIC23.17■■□□□ 1.3
CPNE1Q99829 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
CPNE1Q99829 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.17■■□□□ 1.3
CPNE1Q99829 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.17■■□□□ 1.3
CPNE1Q99829 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.17■■□□□ 1.3
CPNE1Q99829 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.17■■□□□ 1.3
CPNE1Q99829 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE1Q99829 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE1Q99829 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CPNE1Q99829 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE1Q99829 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE1Q99829 AC012676.1-201ENST00000574705 1949 ntBASIC23.16■■□□□ 1.3
CPNE1Q99829 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.16■■□□□ 1.3
CPNE1Q99829 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CPNE1Q99829 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CPNE1Q99829 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE1Q99829 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE1Q99829 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE1Q99829 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE1Q99829 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CPNE1Q99829 SPCS2P3-201ENST00000500401 656 ntBASIC23.15■■□□□ 1.3
CPNE1Q99829 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.15■■□□□ 1.3
CPNE1Q99829 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.15■■□□□ 1.3
CPNE1Q99829 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.15■■□□□ 1.3
CPNE1Q99829 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE1Q99829 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE1Q99829 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CPNE1Q99829 AC090877.2-201ENST00000558441 1738 ntBASIC23.14■■□□□ 1.3
CPNE1Q99829 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPNE1Q99829 AC087393.1-201ENST00000582896 145 ntBASIC23.14■■□□□ 1.29
CPNE1Q99829 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.14■■□□□ 1.29
CPNE1Q99829 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CPNE1Q99829 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
CPNE1Q99829 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.13■■□□□ 1.29
CPNE1Q99829 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE1Q99829 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE1Q99829 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE1Q99829 AC133561.1-201ENST00000568600 2415 ntBASIC23.13■■□□□ 1.29
CPNE1Q99829 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE1Q99829 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.13■■□□□ 1.29
CPNE1Q99829 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE1Q99829 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CPNE1Q99829 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CPNE1Q99829 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE1Q99829 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CPNE1Q99829 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.12■■□□□ 1.29
CPNE1Q99829 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.12■■□□□ 1.29
CPNE1Q99829 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE1Q99829 AC068473.5-201ENST00000616428 2072 ntBASIC23.12■■□□□ 1.29
CPNE1Q99829 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE1Q99829 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.12■■□□□ 1.29
CPNE1Q99829 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE1Q99829 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
CPNE1Q99829 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE1Q99829 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE1Q99829 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.11■■□□□ 1.29
CPNE1Q99829 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE1Q99829 AL592295.1-201ENST00000400984 884 ntBASIC23.11■■□□□ 1.29
CPNE1Q99829 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CPNE1Q99829 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CPNE1Q99829 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.11■■□□□ 1.29
CPNE1Q99829 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE1Q99829 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE1Q99829 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE1Q99829 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE1Q99829 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CPNE1Q99829 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE1Q99829 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE1Q99829 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE1Q99829 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms