Protein–RNA interactions for Protein: Q96LD1

SGCZ, Zeta-sarcoglycan, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCZQ96LD1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.29■■□□□ 1
SGCZQ96LD1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.29■■□□□ 1
SGCZQ96LD1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.29■■□□□ 1
SGCZQ96LD1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SGCZQ96LD1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SGCZQ96LD1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SGCZQ96LD1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.28■■□□□ 1
SGCZQ96LD1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.28■■□□□ 1
SGCZQ96LD1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.28■■□□□ 1
SGCZQ96LD1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.28■■□□□ 1
SGCZQ96LD1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.28■■□□□ 1
SGCZQ96LD1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.27■■□□□ 1
SGCZQ96LD1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SGCZQ96LD1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SGCZQ96LD1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.27■■□□□ 1
SGCZQ96LD1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.27■■□□□ 1
SGCZQ96LD1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.27■■□□□ 1
SGCZQ96LD1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SGCZQ96LD1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SGCZQ96LD1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGCZQ96LD1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.26■□□□□ 0.99
SGCZQ96LD1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGCZQ96LD1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.26■□□□□ 0.99
SGCZQ96LD1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGCZQ96LD1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SGCZQ96LD1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.26■□□□□ 0.99
SGCZQ96LD1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SGCZQ96LD1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGCZQ96LD1 SNX5-217ENST00000606557 1087 ntBASIC21.25■□□□□ 0.99
SGCZQ96LD1 MIR6722-201ENST00000617286 78 ntBASIC21.25■□□□□ 0.99
SGCZQ96LD1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGCZQ96LD1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGCZQ96LD1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SGCZQ96LD1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SGCZQ96LD1 MIR6724-1-201ENST00000616420 92 ntBASIC21.24■□□□□ 0.99
SGCZQ96LD1 MIR6724-2-201ENST00000616483 92 ntBASIC21.24■□□□□ 0.99
SGCZQ96LD1 MIR6724-4-201ENST00000617390 92 ntBASIC21.24■□□□□ 0.99
SGCZQ96LD1 MIR6724-3-201ENST00000622482 92 ntBASIC21.24■□□□□ 0.99
SGCZQ96LD1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.24■□□□□ 0.99
SGCZQ96LD1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.24■□□□□ 0.99
SGCZQ96LD1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SGCZQ96LD1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SGCZQ96LD1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGCZQ96LD1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGCZQ96LD1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SGCZQ96LD1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.23■□□□□ 0.99
SGCZQ96LD1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SGCZQ96LD1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.23■□□□□ 0.99
SGCZQ96LD1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.23■□□□□ 0.99
SGCZQ96LD1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.23■□□□□ 0.99
SGCZQ96LD1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SGCZQ96LD1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SGCZQ96LD1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGCZQ96LD1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGCZQ96LD1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.22■□□□□ 0.99
SGCZQ96LD1 AC004448.1-201ENST00000458332 883 ntBASIC21.22■□□□□ 0.99
SGCZQ96LD1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.22■□□□□ 0.99
SGCZQ96LD1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.22■□□□□ 0.99
SGCZQ96LD1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGCZQ96LD1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SGCZQ96LD1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SGCZQ96LD1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
SGCZQ96LD1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SGCZQ96LD1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
SGCZQ96LD1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.21■□□□□ 0.99
SGCZQ96LD1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SGCZQ96LD1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SGCZQ96LD1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.21■□□□□ 0.99
SGCZQ96LD1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.21■□□□□ 0.99
SGCZQ96LD1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.21■□□□□ 0.99
SGCZQ96LD1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SGCZQ96LD1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.2■□□□□ 0.98
SGCZQ96LD1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SGCZQ96LD1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.2■□□□□ 0.98
SGCZQ96LD1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SGCZQ96LD1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.2■□□□□ 0.98
SGCZQ96LD1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SGCZQ96LD1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SGCZQ96LD1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
SGCZQ96LD1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.19■□□□□ 0.98
SGCZQ96LD1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.19■□□□□ 0.98
SGCZQ96LD1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SGCZQ96LD1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SGCZQ96LD1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SGCZQ96LD1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SGCZQ96LD1 AC022211.4-201ENST00000625094 2161 ntBASIC21.19■□□□□ 0.98
SGCZQ96LD1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.18■□□□□ 0.98
SGCZQ96LD1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.18■□□□□ 0.98
SGCZQ96LD1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SGCZQ96LD1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SGCZQ96LD1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SGCZQ96LD1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms