Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VPS33AQ96AX1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS33AQ96AX1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 FOXO3B-201ENST00000395675 1928 ntBASIC22.23■■□□□ 1.15
VPS33AQ96AX1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 C9orf163-202ENST00000624034 2573 ntBASIC22.23■■□□□ 1.15
VPS33AQ96AX1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33AQ96AX1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33AQ96AX1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VPS33AQ96AX1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33AQ96AX1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33AQ96AX1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS33AQ96AX1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33AQ96AX1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33AQ96AX1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33AQ96AX1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
VPS33AQ96AX1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33AQ96AX1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33AQ96AX1 AC007029.1-201ENST00000604183 313 ntBASIC22.21■■□□□ 1.15
VPS33AQ96AX1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
VPS33AQ96AX1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS33AQ96AX1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33AQ96AX1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33AQ96AX1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 RAP2CP1-202ENST00000605179 643 ntBASIC22.18■■□□□ 1.14
VPS33AQ96AX1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
VPS33AQ96AX1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33AQ96AX1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS33AQ96AX1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33AQ96AX1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33AQ96AX1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.15■■□□□ 1.14
VPS33AQ96AX1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33AQ96AX1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
VPS33AQ96AX1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.14■■□□□ 1.14
VPS33AQ96AX1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS33AQ96AX1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.14■■□□□ 1.13
VPS33AQ96AX1 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.14■■□□□ 1.13
VPS33AQ96AX1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.13
VPS33AQ96AX1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33AQ96AX1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33AQ96AX1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33AQ96AX1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33AQ96AX1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.13■■□□□ 1.13
VPS33AQ96AX1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.13■■□□□ 1.13
VPS33AQ96AX1 AC026202.3-201ENST00000600805 1127 ntBASIC22.13■■□□□ 1.13
VPS33AQ96AX1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33AQ96AX1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS33AQ96AX1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33AQ96AX1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms