Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS1Q92902 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HPS1Q92902 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS1Q92902 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HPS1Q92902 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.9■□□□□ 0.94
HPS1Q92902 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.9■□□□□ 0.94
HPS1Q92902 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HPS1Q92902 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS1Q92902 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.9■□□□□ 0.94
HPS1Q92902 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.9■□□□□ 0.94
HPS1Q92902 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS1Q92902 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.9■□□□□ 0.94
HPS1Q92902 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HPS1Q92902 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS1Q92902 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HPS1Q92902 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
HPS1Q92902 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.89■□□□□ 0.94
HPS1Q92902 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
HPS1Q92902 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.89■□□□□ 0.94
HPS1Q92902 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
HPS1Q92902 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.89■□□□□ 0.94
HPS1Q92902 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HPS1Q92902 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HPS1Q92902 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.89■□□□□ 0.93
HPS1Q92902 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HPS1Q92902 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS1Q92902 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.89■□□□□ 0.93
HPS1Q92902 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.89■□□□□ 0.93
HPS1Q92902 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS1Q92902 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS1Q92902 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.88■□□□□ 0.93
HPS1Q92902 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS1Q92902 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HPS1Q92902 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.88■□□□□ 0.93
HPS1Q92902 AP004609.3-201ENST00000610705 1884 ntBASIC20.88■□□□□ 0.93
HPS1Q92902 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS1Q92902 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HPS1Q92902 C1orf229-201ENST00000623686 2258 ntBASIC20.88■□□□□ 0.93
HPS1Q92902 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS1Q92902 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
HPS1Q92902 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS1Q92902 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS1Q92902 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HPS1Q92902 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.87■□□□□ 0.93
HPS1Q92902 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HPS1Q92902 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
HPS1Q92902 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.87■□□□□ 0.93
HPS1Q92902 AL033527.3-201ENST00000566366 1196 ntBASIC20.87■□□□□ 0.93
HPS1Q92902 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS1Q92902 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HPS1Q92902 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.86■□□□□ 0.93
HPS1Q92902 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS1Q92902 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS1Q92902 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS1Q92902 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS1Q92902 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS1Q92902 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS1Q92902 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HPS1Q92902 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 KRT18P60-201ENST00000312876 1297 ntBASIC20.85■□□□□ 0.93
HPS1Q92902 TSPY13P-201ENST00000338964 914 ntBASIC20.85■□□□□ 0.93
HPS1Q92902 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.85■□□□□ 0.93
HPS1Q92902 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 EP400NL-214ENST00000641289 2402 ntBASIC20.85■□□□□ 0.93
HPS1Q92902 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS1Q92902 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.85■□□□□ 0.93
HPS1Q92902 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.84■□□□□ 0.93
HPS1Q92902 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.84■□□□□ 0.93
HPS1Q92902 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS1Q92902 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS1Q92902 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HPS1Q92902 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS1Q92902 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HPS1Q92902 AL157400.5-201ENST00000507624 621 ntBASIC20.84■□□□□ 0.93
HPS1Q92902 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.84■□□□□ 0.93
HPS1Q92902 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS1Q92902 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS1Q92902 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS1Q92902 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HPS1Q92902 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HPS1Q92902 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.83■□□□□ 0.93
HPS1Q92902 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HPS1Q92902 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HPS1Q92902 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HPS1Q92902 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.83■□□□□ 0.92
HPS1Q92902 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
HPS1Q92902 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
HPS1Q92902 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.83■□□□□ 0.92
HPS1Q92902 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HPS1Q92902 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HPS1Q92902 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
HPS1Q92902 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.82■□□□□ 0.92
HPS1Q92902 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.82■□□□□ 0.92
HPS1Q92902 AC007029.1-201ENST00000604183 313 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms