Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L1Q8WWY6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 GUSBP5-202ENST00000510805 1989 ntBASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MBD3L1Q8WWY6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 AL359258.2-201ENST00000564063 1566 ntBASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.2■□□□□ 0.5
MBD3L1Q8WWY6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 C1orf229-201ENST00000623686 2258 ntBASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD3L1Q8WWY6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 DUSP8P3-201ENST00000399571 1760 ntBASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD3L1Q8WWY6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 ANOS2P-203ENST00000472227 1816 ntBASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MBD3L1Q8WWY6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD3L1Q8WWY6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD3L1Q8WWY6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MBD3L1Q8WWY6 MIR219A2-201ENST00000608502 1504 ntBASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.14■□□□□ 0.49
MBD3L1Q8WWY6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms