Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 HLA-L-209ENST00000420110 1011 ntBASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC168Q8NDH2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC168Q8NDH2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC168Q8NDH2 AC004911.1-201ENST00000416316 871 ntBASIC19.68■□□□□ 0.74
CCDC168Q8NDH2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC168Q8NDH2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC168Q8NDH2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC168Q8NDH2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC168Q8NDH2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC168Q8NDH2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC168Q8NDH2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.66■□□□□ 0.74
CCDC168Q8NDH2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 AC233992.3-201ENST00000607491 485 ntBASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 LINC01003-201ENST00000564834 1764 ntBASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC168Q8NDH2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
CCDC168Q8NDH2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC168Q8NDH2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.64■□□□□ 0.74
CCDC168Q8NDH2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC168Q8NDH2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC168Q8NDH2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC168Q8NDH2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC168Q8NDH2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 AC139426.1-201ENST00000568218 2529 ntBASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC168Q8NDH2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 RAP2CP1-201ENST00000605103 478 ntBASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 AC123595.1-201ENST00000440769 1046 ntBASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC168Q8NDH2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC168Q8NDH2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC168Q8NDH2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC168Q8NDH2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC168Q8NDH2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC168Q8NDH2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC168Q8NDH2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC168Q8NDH2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms