Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ARHGEF39Q8N4T4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 AC092028.1-203ENST00000608262 953 ntBASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ARHGEF39Q8N4T4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 AP003733.4-201ENST00000623785 1697 ntBASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.03■■□□□ 1.12
ARHGEF39Q8N4T4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ARHGEF39Q8N4T4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ARHGEF39Q8N4T4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
ARHGEF39Q8N4T4 UNC93B8-201ENST00000511903 705 ntBASIC22.02■■□□□ 1.12
ARHGEF39Q8N4T4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.02■■□□□ 1.12
ARHGEF39Q8N4T4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ARHGEF39Q8N4T4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.01■■□□□ 1.11
ARHGEF39Q8N4T4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ARHGEF39Q8N4T4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ARHGEF39Q8N4T4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.01■■□□□ 1.11
ARHGEF39Q8N4T4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ARHGEF39Q8N4T4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.01■■□□□ 1.11
ARHGEF39Q8N4T4 HLA-L-211ENST00000482052 1765 ntBASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ARHGEF39Q8N4T4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ARHGEF39Q8N4T4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ARHGEF39Q8N4T4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.99■■□□□ 1.11
ARHGEF39Q8N4T4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.99■■□□□ 1.11
ARHGEF39Q8N4T4 SNX5-217ENST00000606557 1087 ntBASIC21.99■■□□□ 1.11
ARHGEF39Q8N4T4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ARHGEF39Q8N4T4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.99■■□□□ 1.11
ARHGEF39Q8N4T4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 AC131274.2-201ENST00000580697 1507 ntBASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.98■■□□□ 1.11
ARHGEF39Q8N4T4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.97■■□□□ 1.11
ARHGEF39Q8N4T4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF39Q8N4T4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
ARHGEF39Q8N4T4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 AL356441.2-201ENST00000443009 864 ntBASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms