Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC29.66■■■□□ 2.34
COL23A1Q86Y22 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 AC099791.1-201ENST00000416440 715 ntBASIC29.65■■■□□ 2.34
COL23A1Q86Y22 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
COL23A1Q86Y22 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
COL23A1Q86Y22 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.64■■■□□ 2.34
COL23A1Q86Y22 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.64■■■□□ 2.34
COL23A1Q86Y22 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.64■■■□□ 2.34
COL23A1Q86Y22 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.64■■■□□ 2.34
COL23A1Q86Y22 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.63■■■□□ 2.33
COL23A1Q86Y22 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.63■■■□□ 2.33
COL23A1Q86Y22 AC005703.6-201ENST00000623265 1329 ntBASIC29.63■■■□□ 2.33
COL23A1Q86Y22 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 AC099791.2-201ENST00000605725 427 ntBASIC29.62■■■□□ 2.33
COL23A1Q86Y22 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL23A1Q86Y22 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL23A1Q86Y22 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL23A1Q86Y22 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 AC011298.3-201ENST00000615796 283 ntBASIC29.6■■■□□ 2.33
COL23A1Q86Y22 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.6■■■□□ 2.33
COL23A1Q86Y22 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL23A1Q86Y22 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.59■■■□□ 2.33
COL23A1Q86Y22 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
COL23A1Q86Y22 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.59■■■□□ 2.33
COL23A1Q86Y22 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.59■■■□□ 2.33
COL23A1Q86Y22 AL137784.2-201ENST00000607332 1000 ntBASIC29.59■■■□□ 2.33
COL23A1Q86Y22 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL23A1Q86Y22 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL23A1Q86Y22 AC092437.1-201ENST00000624794 1048 ntBASIC29.58■■■□□ 2.33
COL23A1Q86Y22 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.57■■■□□ 2.32
COL23A1Q86Y22 AC034268.1-201ENST00000441047 882 ntBASIC29.57■■■□□ 2.32
COL23A1Q86Y22 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.57■■■□□ 2.32
COL23A1Q86Y22 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.57■■■□□ 2.32
COL23A1Q86Y22 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL23A1Q86Y22 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.57■■■□□ 2.32
COL23A1Q86Y22 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL23A1Q86Y22 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC29.56■■■□□ 2.32
COL23A1Q86Y22 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
COL23A1Q86Y22 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.56■■■□□ 2.32
COL23A1Q86Y22 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.56■■■□□ 2.32
COL23A1Q86Y22 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.56■■■□□ 2.32
COL23A1Q86Y22 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
COL23A1Q86Y22 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL23A1Q86Y22 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.55■■■□□ 2.32
COL23A1Q86Y22 KRT18P5-201ENST00000436075 1291 ntBASIC29.55■■■□□ 2.32
COL23A1Q86Y22 AL138724.1-201ENST00000606771 1088 ntBASIC29.55■■■□□ 2.32
COL23A1Q86Y22 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL23A1Q86Y22 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.54■■■□□ 2.32
COL23A1Q86Y22 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.54■■■□□ 2.32
COL23A1Q86Y22 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL23A1Q86Y22 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
COL23A1Q86Y22 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.53■■■□□ 2.32
COL23A1Q86Y22 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
COL23A1Q86Y22 AC139426.1-201ENST00000568218 2529 ntBASIC29.53■■■□□ 2.32
COL23A1Q86Y22 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL23A1Q86Y22 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
COL23A1Q86Y22 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL23A1Q86Y22 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL23A1Q86Y22 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
COL23A1Q86Y22 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL23A1Q86Y22 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.52■■■□□ 2.32
COL23A1Q86Y22 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.52■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms