Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRTM3Q86VH5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 MIR6724-1-201ENST00000616420 92 ntBASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 MIR6724-2-201ENST00000616483 92 ntBASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 MIR6724-4-201ENST00000617390 92 ntBASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 MIR6724-3-201ENST00000622482 92 ntBASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.63■■□□□ 1.53
LRRTM3Q86VH5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM3Q86VH5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM3Q86VH5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM3Q86VH5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM3Q86VH5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LRRTM3Q86VH5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LRRTM3Q86VH5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.6■■□□□ 1.53
LRRTM3Q86VH5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.6■■□□□ 1.53
LRRTM3Q86VH5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.6■■□□□ 1.53
LRRTM3Q86VH5 AL117332.1-201ENST00000622628 974 ntBASIC24.6■■□□□ 1.53
LRRTM3Q86VH5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LRRTM3Q86VH5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LRRTM3Q86VH5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.59■■□□□ 1.53
LRRTM3Q86VH5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.59■■□□□ 1.53
LRRTM3Q86VH5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRTM3Q86VH5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
LRRTM3Q86VH5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.59■■□□□ 1.53
LRRTM3Q86VH5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.58■■□□□ 1.53
LRRTM3Q86VH5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LRRTM3Q86VH5 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.58■■□□□ 1.53
LRRTM3Q86VH5 MIR3621-201ENST00000580529 85 ntBASIC24.58■■□□□ 1.53
LRRTM3Q86VH5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.58■■□□□ 1.53
LRRTM3Q86VH5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRTM3Q86VH5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LRRTM3Q86VH5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
LRRTM3Q86VH5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 AC008406.3-201ENST00000620001 1374 ntBASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 MIR6722-201ENST00000617286 78 ntBASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM3Q86VH5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM3Q86VH5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 AC004448.1-201ENST00000458332 883 ntBASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 AC131274.2-201ENST00000580697 1507 ntBASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
LRRTM3Q86VH5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 AC131281.2-201ENST00000520478 145 ntBASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 AC022211.4-201ENST00000625094 2161 ntBASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.54■■□□□ 1.52
LRRTM3Q86VH5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.53■■□□□ 1.52
LRRTM3Q86VH5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms