Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LPCAT4Q643R3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
LPCAT4Q643R3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LPCAT4Q643R3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
LPCAT4Q643R3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
LPCAT4Q643R3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.89■■□□□ 1.09
LPCAT4Q643R3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.89■■□□□ 1.09
LPCAT4Q643R3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LPCAT4Q643R3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LPCAT4Q643R3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LPCAT4Q643R3 AC137767.1-201ENST00000602918 1920 ntBASIC21.88■■□□□ 1.09
LPCAT4Q643R3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LPCAT4Q643R3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LPCAT4Q643R3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 SUZ12P1-203ENST00000578195 985 ntBASIC21.86■■□□□ 1.09
LPCAT4Q643R3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LPCAT4Q643R3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 MIR6089-201ENST00000616698 64 ntBASIC21.85■■□□□ 1.09
LPCAT4Q643R3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 GUSBP5-202ENST00000510805 1989 ntBASIC21.85■■□□□ 1.09
LPCAT4Q643R3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LPCAT4Q643R3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 HLA-L-211ENST00000482052 1765 ntBASIC21.84■■□□□ 1.09
LPCAT4Q643R3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LPCAT4Q643R3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LPCAT4Q643R3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.83■■□□□ 1.09
LPCAT4Q643R3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
LPCAT4Q643R3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LPCAT4Q643R3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LPCAT4Q643R3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LPCAT4Q643R3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LPCAT4Q643R3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LPCAT4Q643R3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.83■■□□□ 1.08
LPCAT4Q643R3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LPCAT4Q643R3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LPCAT4Q643R3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LPCAT4Q643R3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.82■■□□□ 1.08
LPCAT4Q643R3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LPCAT4Q643R3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LPCAT4Q643R3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 AC127496.7-201ENST00000625110 1798 ntBASIC21.81■■□□□ 1.08
LPCAT4Q643R3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LPCAT4Q643R3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LPCAT4Q643R3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms