Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC3A1Q07837 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC3A1Q07837 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC3A1Q07837 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 RP9P-202ENST00000450133 1212 ntBASIC20.72■□□□□ 0.91
SLC3A1Q07837 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SLC3A1Q07837 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC3A1Q07837 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC3A1Q07837 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC3A1Q07837 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC3A1Q07837 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SLC3A1Q07837 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC3A1Q07837 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SLC3A1Q07837 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC3A1Q07837 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.71■□□□□ 0.91
SLC3A1Q07837 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC3A1Q07837 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC3A1Q07837 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC3A1Q07837 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC3A1Q07837 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC3A1Q07837 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC3A1Q07837 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC3A1Q07837 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC3A1Q07837 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SLC3A1Q07837 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC3A1Q07837 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC3A1Q07837 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC3A1Q07837 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC3A1Q07837 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC3A1Q07837 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC3A1Q07837 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC3A1Q07837 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC3A1Q07837 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC3A1Q07837 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC3A1Q07837 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC3A1Q07837 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC3A1Q07837 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC3A1Q07837 U85056.1-201ENST00000616429 682 ntBASIC20.68■□□□□ 0.9
SLC3A1Q07837 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC3A1Q07837 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC3A1Q07837 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC3A1Q07837 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC3A1Q07837 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC3A1Q07837 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC3A1Q07837 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC3A1Q07837 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC3A1Q07837 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC3A1Q07837 AC012354.3-201ENST00000623734 483 ntBASIC20.67■□□□□ 0.9
SLC3A1Q07837 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC3A1Q07837 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC3A1Q07837 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC3A1Q07837 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC3A1Q07837 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC3A1Q07837 AC133552.2-201ENST00000619106 1032 ntBASIC20.66■□□□□ 0.9
SLC3A1Q07837 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC3A1Q07837 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC3A1Q07837 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC3A1Q07837 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC3A1Q07837 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC3A1Q07837 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
SLC3A1Q07837 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC3A1Q07837 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC3A1Q07837 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC3A1Q07837 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC3A1Q07837 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC3A1Q07837 AC093536.1-201ENST00000569153 554 ntBASIC20.65■□□□□ 0.9
SLC3A1Q07837 MIR6089-201ENST00000616698 64 ntBASIC20.65■□□□□ 0.9
SLC3A1Q07837 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SLC3A1Q07837 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC3A1Q07837 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC3A1Q07837 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC3A1Q07837 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC3A1Q07837 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC3A1Q07837 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLC3A1Q07837 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC3A1Q07837 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC3A1Q07837 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC3A1Q07837 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC3A1Q07837 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC3A1Q07837 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC3A1Q07837 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC3A1Q07837 C9orf163-202ENST00000624034 2573 ntBASIC20.63■□□□□ 0.89
SLC3A1Q07837 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC3A1Q07837 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC3A1Q07837 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC3A1Q07837 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC3A1Q07837 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC3A1Q07837 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC3A1Q07837 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC3A1Q07837 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SLC3A1Q07837 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC3A1Q07837 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC3A1Q07837 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms