Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 NUD1YOR373W 2556 nt3.73□□□□□ -1.81
LSM6Q06406 MPS3YJL019W 2049 nt3.73□□□□□ -1.81
LSM6Q06406 MPH3YJR160C 1809 nt3.72□□□□□ -1.81
LSM6Q06406 KAP114YGL241W 3015 nt3.72□□□□□ -1.81
LSM6Q06406 TUL1YKL034W 2277 nt3.72□□□□□ -1.81
LSM6Q06406 CDC19YAL038W 1503 nt3.72□□□□□ -1.81
LSM6Q06406 YGR016WYGR016W 573 nt3.72□□□□□ -1.81
LSM6Q06406 SNO4YMR322C 714 nt3.72□□□□□ -1.81
LSM6Q06406 AAD14YNL331C 1131 nt3.72□□□□□ -1.81
LSM6Q06406 HSP33YOR391C 714 nt3.72□□□□□ -1.81
LSM6Q06406 MET31YPL038W 534 nt3.72□□□□□ -1.81
LSM6Q06406 HSP32YPL280W 714 nt3.72□□□□□ -1.81
LSM6Q06406 MRPL36YBR122C 534 nt3.72□□□□□ -1.81
LSM6Q06406 ILV6YCL009C 930 nt3.72□□□□□ -1.81
LSM6Q06406 ULA1YPL003W 1389 nt3.72□□□□□ -1.81
LSM6Q06406 HXT7YDR342C 1713 nt3.72□□□□□ -1.81
LSM6Q06406 HXT6YDR343C 1713 nt3.72□□□□□ -1.81
LSM6Q06406 ATG20YDL113C 1923 nt3.72□□□□□ -1.81
LSM6Q06406 VHS2YIL135C 1311 nt3.71□□□□□ -1.81
LSM6Q06406 ATH1YPR026W 3636 nt3.71□□□□□ -1.81
LSM6Q06406 CYS4YGR155W 1524 nt3.71□□□□□ -1.82
LSM6Q06406 YEL067CYEL067C 588 nt3.71□□□□□ -1.82
LSM6Q06406 LYS5YGL154C 819 nt3.71□□□□□ -1.82
LSM6Q06406 RRP4YHR069C 1080 nt3.71□□□□□ -1.82
LSM6Q06406 YIR020W-AYIR020W-A 243 nt3.71□□□□□ -1.82
LSM6Q06406 YPL113CYPL113C 1191 nt3.71□□□□□ -1.82
LSM6Q06406 BRL1YHR036W 1416 nt3.7□□□□□ -1.82
LSM6Q06406 SHE10YGL228W 1734 nt3.7□□□□□ -1.82
LSM6Q06406 SPL2YHR136C 447 nt3.7□□□□□ -1.82
LSM6Q06406 YIL029W-AYIL029W-A 372 nt3.7□□□□□ -1.82
LSM6Q06406 MRI1YPR118W 1236 nt3.7□□□□□ -1.82
LSM6Q06406 snR19snR19 568 nt3.7□□□□□ -1.82
LSM6Q06406 STP4YDL048C 1473 nt3.7□□□□□ -1.82
LSM6Q06406 PRR1YKL116C 1557 nt3.7□□□□□ -1.82
LSM6Q06406 SEC18YBR080C 2277 nt3.7□□□□□ -1.82
LSM6Q06406 CLA4YNL298W 2529 nt3.7□□□□□ -1.82
LSM6Q06406 BOP2YLR267W 1713 nt3.7□□□□□ -1.82
LSM6Q06406 MSE1YOL033W 1611 nt3.7□□□□□ -1.82
LSM6Q06406 MET7YOR241W 1647 nt3.7□□□□□ -1.82
LSM6Q06406 PLB3YOL011W 2061 nt3.69□□□□□ -1.82
LSM6Q06406 YCL065WYCL065W 369 nt3.69□□□□□ -1.82
LSM6Q06406 PCT1YGR202C 1275 nt3.69□□□□□ -1.82
LSM6Q06406 MED6YHR058C 888 nt3.69□□□□□ -1.82
LSM6Q06406 HSP82YPL240C 2130 nt3.69□□□□□ -1.82
LSM6Q06406 GIP2YER054C 1647 nt3.69□□□□□ -1.82
LSM6Q06406 RPT1YKL145W 1404 nt3.69□□□□□ -1.82
LSM6Q06406 YRA1YDR381W 681 nt3.68□□□□□ -1.82
LSM6Q06406 YDR417CYDR417C 372 nt3.68□□□□□ -1.82
LSM6Q06406 NCS6YGL211W 1080 nt3.68□□□□□ -1.82
LSM6Q06406 YMR245WYMR245W 621 nt3.68□□□□□ -1.82
LSM6Q06406 ETR1YBR026C 1143 nt3.68□□□□□ -1.82
LSM6Q06406 ESF1YDR365C 1887 nt3.68□□□□□ -1.82
LSM6Q06406 YGR266WYGR266W 2106 nt3.68□□□□□ -1.82
LSM6Q06406 VBA2YBR293W 1425 nt3.68□□□□□ -1.82
LSM6Q06406 KAR2YJL034W 2049 nt3.68□□□□□ -1.82
LSM6Q06406 YHR045WYHR045W 1683 nt3.68□□□□□ -1.82
LSM6Q06406 YPL260WYPL260W 1656 nt3.68□□□□□ -1.82
LSM6Q06406 GCN20YFR009W 2259 nt3.68□□□□□ -1.82
LSM6Q06406 TRS23YDR246W 660 nt3.67□□□□□ -1.82
LSM6Q06406 URA3YEL021W 804 nt3.67□□□□□ -1.82
LSM6Q06406 UTR4YEL038W 684 nt3.67□□□□□ -1.82
LSM6Q06406 HVG1YER039C 750 nt3.67□□□□□ -1.82
LSM6Q06406 SOD2YHR008C 702 nt3.67□□□□□ -1.82
LSM6Q06406 YJL215CYJL215C 360 nt3.67□□□□□ -1.82
LSM6Q06406 YLR361C-AYLR361C-A 297 nt3.67□□□□□ -1.82
LSM6Q06406 MAP2YBL091C 1266 nt3.67□□□□□ -1.82
LSM6Q06406 VID22YLR373C 2706 nt3.67□□□□□ -1.82
LSM6Q06406 NOT3YIL038C 2511 nt3.67□□□□□ -1.82
LSM6Q06406 ARN1YHL040C 1884 nt3.67□□□□□ -1.82
LSM6Q06406 DEF1YKL054C 2217 nt3.66□□□□□ -1.82
LSM6Q06406 FMP33YJL161W 543 nt3.66□□□□□ -1.82
LSM6Q06406 YLR346CYLR346C 306 nt3.66□□□□□ -1.82
LSM6Q06406 YIM1YMR152W 1098 nt3.66□□□□□ -1.82
LSM6Q06406 ROX3YBL093C 663 nt3.66□□□□□ -1.82
LSM6Q06406 RPL21BYPL079W 483 nt3.66□□□□□ -1.82
LSM6Q06406 ORC5YNL261W 1440 nt3.66□□□□□ -1.82
LSM6Q06406 ADE12YNL220W 1302 nt3.66□□□□□ -1.82
LSM6Q06406 SHM1YBR263W 1473 nt3.66□□□□□ -1.82
LSM6Q06406 APL6YGR261C 2430 nt3.65□□□□□ -1.82
LSM6Q06406 OPT1YJL212C 2400 nt3.65□□□□□ -1.82
LSM6Q06406 IMG1YCR046C 510 nt3.65□□□□□ -1.83
LSM6Q06406 EDC2YER035W 438 nt3.65□□□□□ -1.83
LSM6Q06406 PDE1YGL248W 1110 nt3.65□□□□□ -1.83
LSM6Q06406 TRX2YGR209C 315 nt3.65□□□□□ -1.83
LSM6Q06406 YKL023WYKL023W 834 nt3.65□□□□□ -1.83
LSM6Q06406 YPL245WYPL245W 1365 nt3.64□□□□□ -1.83
LSM6Q06406 TRM44YPL030W 1704 nt3.64□□□□□ -1.83
LSM6Q06406 PRP28YDR243C 1767 nt3.64□□□□□ -1.83
LSM6Q06406 ZUO1YGR285C 1302 nt3.64□□□□□ -1.83
LSM6Q06406 STR2YJR130C 1920 nt3.64□□□□□ -1.83
LSM6Q06406 GRC3YLL035W 1899 nt3.63□□□□□ -1.83
LSM6Q06406 GCV3YAL044C 513 nt3.63□□□□□ -1.83
LSM6Q06406 YPR160C-AYPR160C-A 285 nt3.63□□□□□ -1.83
LSM6Q06406 BUD22YMR014W 1560 nt3.63□□□□□ -1.83
LSM6Q06406 PMA1YGL008C 2757 nt3.63□□□□□ -1.83
LSM6Q06406 CTT1YGR088W 1689 nt3.62□□□□□ -1.83
LSM6Q06406 SUR2YDR297W 1050 nt3.62□□□□□ -1.83
LSM6Q06406 GAL4YPL248C 2646 nt3.62□□□□□ -1.83
LSM6Q06406 HPC2YBR215W 1878 nt3.62□□□□□ -1.83
LSM6Q06406 RIM21YNL294C 1602 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms