Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H1AQ02539 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H1AQ02539 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 KRT18P10-201ENST00000388836 1287 ntBASIC17.6■□□□□ 0.41
HIST1H1AQ02539 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 AC133552.2-201ENST00000619106 1032 ntBASIC17.6■□□□□ 0.41
HIST1H1AQ02539 RNF126P1-201ENST00000567452 1320 ntBASIC17.6■□□□□ 0.41
HIST1H1AQ02539 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H1AQ02539 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H1AQ02539 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H1AQ02539 AC009831.1-201ENST00000580420 1582 ntBASIC17.58■□□□□ 0.41
HIST1H1AQ02539 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H1AQ02539 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H1AQ02539 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H1AQ02539 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H1AQ02539 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H1AQ02539 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H1AQ02539 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.57■□□□□ 0.4
HIST1H1AQ02539 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H1AQ02539 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H1AQ02539 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H1AQ02539 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST1H1AQ02539 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H1AQ02539 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H1AQ02539 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H1AQ02539 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST1H1AQ02539 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST1H1AQ02539 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H1AQ02539 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H1AQ02539 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H1AQ02539 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H1AQ02539 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST1H1AQ02539 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H1AQ02539 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H1AQ02539 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H1AQ02539 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HIST1H1AQ02539 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H1AQ02539 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIST1H1AQ02539 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIST1H1AQ02539 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H1AQ02539 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIST1H1AQ02539 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HIST1H1AQ02539 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 FOXO3B-201ENST00000395675 1928 ntBASIC17.53■□□□□ 0.4
HIST1H1AQ02539 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST1H1AQ02539 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms