Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL138724.1-201ENST00000606771 1088 ntBASIC17.21■□□□□ 0.35
PRKDCP78527 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.2■□□□□ 0.34
PRKDCP78527 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRKDCP78527 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRKDCP78527 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PRKDCP78527 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.2■□□□□ 0.34
PRKDCP78527 AC011298.3-201ENST00000615796 283 ntBASIC17.2■□□□□ 0.34
PRKDCP78527 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PRKDCP78527 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PRKDCP78527 AC027612.3-201ENST00000413684 1047 ntBASIC17.2■□□□□ 0.34
PRKDCP78527 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRKDCP78527 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.2■□□□□ 0.34
PRKDCP78527 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRKDCP78527 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.2■□□□□ 0.34
PRKDCP78527 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.19■□□□□ 0.34
PRKDCP78527 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRKDCP78527 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRKDCP78527 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.19■□□□□ 0.34
PRKDCP78527 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.19■□□□□ 0.34
PRKDCP78527 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.19■□□□□ 0.34
PRKDCP78527 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRKDCP78527 AC233992.3-201ENST00000607491 485 ntBASIC17.19■□□□□ 0.34
PRKDCP78527 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.18■□□□□ 0.34
PRKDCP78527 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PRKDCP78527 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.18■□□□□ 0.34
PRKDCP78527 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRKDCP78527 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.18■□□□□ 0.34
PRKDCP78527 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.18■□□□□ 0.34
PRKDCP78527 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.18■□□□□ 0.34
PRKDCP78527 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRKDCP78527 KRT18P61-201ENST00000585825 1298 ntBASIC17.18■□□□□ 0.34
PRKDCP78527 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRKDCP78527 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRKDCP78527 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRKDCP78527 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.17■□□□□ 0.34
PRKDCP78527 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.17■□□□□ 0.34
PRKDCP78527 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRKDCP78527 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PRKDCP78527 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRKDCP78527 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRKDCP78527 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.16■□□□□ 0.34
PRKDCP78527 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRKDCP78527 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRKDCP78527 TERF1P2-201ENST00000583350 1212 ntBASIC17.16■□□□□ 0.34
PRKDCP78527 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.16■□□□□ 0.34
PRKDCP78527 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRKDCP78527 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.15■□□□□ 0.34
PRKDCP78527 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.15■□□□□ 0.34
PRKDCP78527 AC136469.2-201ENST00000623944 1028 ntBASIC17.15■□□□□ 0.34
PRKDCP78527 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.15■□□□□ 0.34
PRKDCP78527 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.15■□□□□ 0.34
PRKDCP78527 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRKDCP78527 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.15■□□□□ 0.34
PRKDCP78527 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.15■□□□□ 0.34
PRKDCP78527 AC004448.1-201ENST00000458332 883 ntBASIC17.15■□□□□ 0.34
PRKDCP78527 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKDCP78527 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.14■□□□□ 0.33
PRKDCP78527 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRKDCP78527 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKDCP78527 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRKDCP78527 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.14■□□□□ 0.33
PRKDCP78527 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKDCP78527 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.14■□□□□ 0.33
PRKDCP78527 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKDCP78527 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKDCP78527 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKDCP78527 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.13■□□□□ 0.33
PRKDCP78527 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.13■□□□□ 0.33
PRKDCP78527 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRKDCP78527 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.13■□□□□ 0.33
PRKDCP78527 TSPY26P-201ENST00000476365 1326 ntBASIC17.13■□□□□ 0.33
PRKDCP78527 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.13■□□□□ 0.33
PRKDCP78527 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRKDCP78527 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.13■□□□□ 0.33
PRKDCP78527 TSPY20P-201ENST00000450910 630 ntBASIC17.13■□□□□ 0.33
PRKDCP78527 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKDCP78527 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKDCP78527 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKDCP78527 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKDCP78527 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.12■□□□□ 0.33
PRKDCP78527 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKDCP78527 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms