Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61BP60468 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61BP60468 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
SEC61BP60468 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SEC61BP60468 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61BP60468 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61BP60468 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61BP60468 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61BP60468 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC12.49□□□□□ -0.41
SEC61BP60468 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC12.49□□□□□ -0.41
SEC61BP60468 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61BP60468 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SEC61BP60468 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61BP60468 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61BP60468 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61BP60468 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61BP60468 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61BP60468 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61BP60468 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC12.48□□□□□ -0.41
SEC61BP60468 AL512631.2-201ENST00000604634 923 ntBASIC12.48□□□□□ -0.41
SEC61BP60468 AC092171.4-201ENST00000609130 632 ntBASIC12.48□□□□□ -0.41
SEC61BP60468 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61BP60468 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61BP60468 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61BP60468 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61BP60468 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SEC61BP60468 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 AC005703.6-201ENST00000623265 1329 ntBASIC12.47□□□□□ -0.41
SEC61BP60468 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC61BP60468 PBX2P1-201ENST00000493219 1291 ntBASIC12.47□□□□□ -0.41
SEC61BP60468 DUX4L19-201ENST00000557448 1267 ntBASIC12.47□□□□□ -0.41
SEC61BP60468 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC61BP60468 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC61BP60468 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC61BP60468 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61BP60468 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 STK32C-205ENST00000456004 607 ntTSL 2 BASIC12.46□□□□□ -0.41
SEC61BP60468 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.46□□□□□ -0.41
SEC61BP60468 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC12.46□□□□□ -0.41
SEC61BP60468 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61BP60468 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC61BP60468 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC12.46□□□□□ -0.42
SEC61BP60468 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC12.46□□□□□ -0.42
SEC61BP60468 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61BP60468 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61BP60468 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61BP60468 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61BP60468 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61BP60468 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SEC61BP60468 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SEC61BP60468 AC004448.1-201ENST00000458332 883 ntBASIC12.45□□□□□ -0.42
SEC61BP60468 QDPR-206ENST00000508623 601 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC61BP60468 AC142381.2-201ENST00000566120 298 ntBASIC12.45□□□□□ -0.42
SEC61BP60468 AC106739.1-201ENST00000617035 715 ntBASIC12.45□□□□□ -0.42
SEC61BP60468 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SEC61BP60468 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61BP60468 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61BP60468 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61BP60468 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61BP60468 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61BP60468 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61BP60468 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61BP60468 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SEC61BP60468 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61BP60468 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 AC010501.1-201ENST00000606270 1962 ntBASIC12.43□□□□□ -0.42
SEC61BP60468 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61BP60468 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SEC61BP60468 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61BP60468 CLTA-206ENST00000466396 695 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61BP60468 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC61BP60468 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61BP60468 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SEC61BP60468 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms