Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.67■■□□□ 1.7
PEX3P56589 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.67■■□□□ 1.7
PEX3P56589 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PEX3P56589 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PEX3P56589 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PEX3P56589 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.66■■□□□ 1.7
PEX3P56589 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PEX3P56589 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PEX3P56589 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PEX3P56589 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PEX3P56589 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PEX3P56589 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PEX3P56589 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.66■■□□□ 1.7
PEX3P56589 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PEX3P56589 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PEX3P56589 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PEX3P56589 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PEX3P56589 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PEX3P56589 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.65■■□□□ 1.7
PEX3P56589 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.65■■□□□ 1.7
PEX3P56589 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PEX3P56589 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PEX3P56589 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PEX3P56589 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PEX3P56589 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.64■■□□□ 1.7
PEX3P56589 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.64■■□□□ 1.7
PEX3P56589 KRT125P-201ENST00000546827 989 ntBASIC25.64■■□□□ 1.7
PEX3P56589 AC021242.3-201ENST00000607598 1377 ntBASIC25.64■■□□□ 1.69
PEX3P56589 HLA-L-211ENST00000482052 1765 ntBASIC25.64■■□□□ 1.69
PEX3P56589 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PEX3P56589 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PEX3P56589 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PEX3P56589 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.62■■□□□ 1.69
PEX3P56589 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.62■■□□□ 1.69
PEX3P56589 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PEX3P56589 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.61■■□□□ 1.69
PEX3P56589 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.61■■□□□ 1.69
PEX3P56589 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.61■■□□□ 1.69
PEX3P56589 MIR4787-201ENST00000607364 84 ntBASIC25.61■■□□□ 1.69
PEX3P56589 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.61■■□□□ 1.69
PEX3P56589 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PEX3P56589 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.6■■□□□ 1.69
PEX3P56589 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.6■■□□□ 1.69
PEX3P56589 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
PEX3P56589 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PEX3P56589 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.6■■□□□ 1.69
PEX3P56589 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PEX3P56589 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PEX3P56589 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.59■■□□□ 1.69
PEX3P56589 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.59■■□□□ 1.69
PEX3P56589 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PEX3P56589 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PEX3P56589 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.59■■□□□ 1.69
PEX3P56589 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PEX3P56589 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PEX3P56589 AC135731.1-201ENST00000569415 2548 ntBASIC25.59■■□□□ 1.69
PEX3P56589 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PEX3P56589 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PEX3P56589 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.58■■□□□ 1.69
PEX3P56589 GUSBP5-201ENST00000418136 578 ntBASIC25.58■■□□□ 1.69
PEX3P56589 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
PEX3P56589 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PEX3P56589 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.57■■□□□ 1.68
PEX3P56589 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PEX3P56589 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PEX3P56589 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PEX3P56589 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.57■■□□□ 1.68
PEX3P56589 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PEX3P56589 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.57■■□□□ 1.68
PEX3P56589 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PEX3P56589 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.57■■□□□ 1.68
PEX3P56589 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
PEX3P56589 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
PEX3P56589 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PEX3P56589 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PEX3P56589 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PEX3P56589 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PEX3P56589 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.55■■□□□ 1.68
PEX3P56589 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PEX3P56589 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PEX3P56589 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PEX3P56589 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PEX3P56589 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.55■■□□□ 1.68
PEX3P56589 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PEX3P56589 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.55■■□□□ 1.68
PEX3P56589 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.55■■□□□ 1.68
PEX3P56589 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
PEX3P56589 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PEX3P56589 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.54■■□□□ 1.68
PEX3P56589 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.54■■□□□ 1.68
PEX3P56589 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PEX3P56589 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PEX3P56589 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PEX3P56589 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.54■■□□□ 1.68
PEX3P56589 AC092028.1-203ENST00000608262 953 ntBASIC25.54■■□□□ 1.68
PEX3P56589 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PEX3P56589 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.54■■□□□ 1.68
PEX3P56589 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PEX3P56589 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PEX3P56589 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms