Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 NIT2YJL126W 924 nt5.9□□□□□ -1.46
RPT4P53549 YAL044W-AYAL044W-A 333 nt5.9□□□□□ -1.46
RPT4P53549 RPA49YNL248C 1248 nt5.9□□□□□ -1.46
RPT4P53549 NHP6AYPR052C 282 nt5.9□□□□□ -1.46
RPT4P53549 STE50YCL032W 1041 nt5.9□□□□□ -1.46
RPT4P53549 RGD1YBR260C 2001 nt5.89□□□□□ -1.47
RPT4P53549 KTI12YKL110C 942 nt5.89□□□□□ -1.47
RPT4P53549 YML101C-AYML101C-A 318 nt5.89□□□□□ -1.47
RPT4P53549 ARG8YOL140W 1272 nt5.89□□□□□ -1.47
RPT4P53549 UBA3YPR066W 900 nt5.89□□□□□ -1.47
RPT4P53549 MCH4YOL119C 1506 nt5.89□□□□□ -1.47
RPT4P53549 PAP1YKR002W 1707 nt5.88□□□□□ -1.47
RPT4P53549 IPK1YDR315C 846 nt5.88□□□□□ -1.47
RPT4P53549 YLF2YHL014C 1218 nt5.88□□□□□ -1.47
RPT4P53549 YIL077CYIL077C 963 nt5.88□□□□□ -1.47
RPT4P53549 SRV2YNL138W 1581 nt5.88□□□□□ -1.47
RPT4P53549 ECM3YOR092W 1842 nt5.88□□□□□ -1.47
RPT4P53549 DPB2YPR175W 2070 nt5.87□□□□□ -1.47
RPT4P53549 ERD1YDR414C 1089 nt5.87□□□□□ -1.47
RPT4P53549 HSP31YDR533C 714 nt5.87□□□□□ -1.47
RPT4P53549 SCS2YER120W 735 nt5.87□□□□□ -1.47
RPT4P53549 YGR139WYGR139W 339 nt5.87□□□□□ -1.47
RPT4P53549 SPL2YHR136C 447 nt5.87□□□□□ -1.47
RPT4P53549 YOR024WYOR024W 324 nt5.87□□□□□ -1.47
RPT4P53549 ACS1YAL054C 2142 nt5.86□□□□□ -1.47
RPT4P53549 YAP1802YGR241C 1707 nt5.86□□□□□ -1.47
RPT4P53549 YEL020CYEL020C 1683 nt5.86□□□□□ -1.47
RPT4P53549 RPN6YDL097C 1305 nt5.86□□□□□ -1.47
RPT4P53549 HEM3YDL205C 984 nt5.86□□□□□ -1.47
RPT4P53549 RPO26YPR187W 468 nt5.86□□□□□ -1.47
RPT4P53549 HXT4YHR092C 1731 nt5.85□□□□□ -1.47
RPT4P53549 PRS1YKL181W 1284 nt5.85□□□□□ -1.47
RPT4P53549 MRPL39YML009C 213 nt5.85□□□□□ -1.47
RPT4P53549 ESC8YOL017W 2145 nt5.85□□□□□ -1.47
RPT4P53549 CUE5YOR042W 1236 nt5.85□□□□□ -1.47
RPT4P53549 RDL2YOR286W 450 nt5.85□□□□□ -1.47
RPT4P53549 PRM1YNL279W 1986 nt5.85□□□□□ -1.47
RPT4P53549 BRF1YGR246C 1791 nt5.85□□□□□ -1.47
RPT4P53549 BNA5YLR231C 1362 nt5.84□□□□□ -1.47
RPT4P53549 RET1YOR207C 3450 nt5.84□□□□□ -1.47
RPT4P53549 VPS72YDR485C 2388 nt5.84□□□□□ -1.47
RPT4P53549 NUP116YMR047C 3342 nt5.84□□□□□ -1.47
RPT4P53549 NCS6YGL211W 1080 nt5.84□□□□□ -1.47
RPT4P53549 CCS1YMR038C 750 nt5.84□□□□□ -1.47
RPT4P53549 HOR7YMR251W-A 180 nt5.84□□□□□ -1.47
RPT4P53549 PCS60YBR222C 1632 nt5.84□□□□□ -1.47
RPT4P53549 NOT3YIL038C 2511 nt5.84□□□□□ -1.47
RPT4P53549 CSC1YLR241W 2349 nt5.83□□□□□ -1.48
RPT4P53549 ATG7YHR171W 1893 nt5.83□□□□□ -1.48
RPT4P53549 FUN19YAL034C 1242 nt5.83□□□□□ -1.48
RPT4P53549 MRPL15YLR312W-A 762 nt5.83□□□□□ -1.48
RPT4P53549 PRR1YKL116C 1557 nt5.83□□□□□ -1.48
RPT4P53549 CHL4YDR254W 1377 nt5.82□□□□□ -1.48
RPT4P53549 SAF1YBR280C 1914 nt5.82□□□□□ -1.48
RPT4P53549 YDL027CYDL027C 1263 nt5.82□□□□□ -1.48
RPT4P53549 IWR1YDL115C 1062 nt5.82□□□□□ -1.48
RPT4P53549 YIF1YNL263C 945 nt5.82□□□□□ -1.48
RPT4P53549 VHT1YGR065C 1782 nt5.82□□□□□ -1.48
RPT4P53549 YIL055CYIL055C 1884 nt5.81□□□□□ -1.48
RPT4P53549 ACS2YLR153C 2052 nt5.81□□□□□ -1.48
RPT4P53549 PDI1YCL043C 1569 nt5.81□□□□□ -1.48
RPT4P53549 DCI1YOR180C 816 nt5.81□□□□□ -1.48
RPT4P53549 SRP101YDR292C 1866 nt5.81□□□□□ -1.48
RPT4P53549 FOL1YNL256W 2475 nt5.81□□□□□ -1.48
RPT4P53549 KTR5YNL029C 1569 nt5.8□□□□□ -1.48
RPT4P53549 YNL247WYNL247W 2304 nt5.8□□□□□ -1.48
RPT4P53549 CAB1YDR531W 1104 nt5.8□□□□□ -1.48
RPT4P53549 CNM67YNL225C 1746 nt5.79□□□□□ -1.48
RPT4P53549 BPL1YDL141W 2073 nt5.79□□□□□ -1.48
RPT4P53549 NQM1YGR043C 1002 nt5.79□□□□□ -1.48
RPT4P53549 COX18YGR062C 951 nt5.79□□□□□ -1.48
RPT4P53549 JJJ3YJR097W 519 nt5.79□□□□□ -1.48
RPT4P53549 SCW10YMR305C 1170 nt5.79□□□□□ -1.48
RPT4P53549 ACC1YNR016C 6702 nt5.79□□□□□ -1.48
RPT4P53549 MPM1YJL066C 759 nt5.78□□□□□ -1.48
RPT4P53549 MVD1YNR043W 1191 nt5.78□□□□□ -1.48
RPT4P53549 NTH2YBR001C 2343 nt5.78□□□□□ -1.48
RPT4P53549 TBF1YPL128C 1689 nt5.78□□□□□ -1.48
RPT4P53549 APM4YOL062C 1476 nt5.77□□□□□ -1.49
RPT4P53549 EMW1YNL313C 2715 nt5.77□□□□□ -1.49
RPT4P53549 SUB2YDL084W 1341 nt5.77□□□□□ -1.49
RPT4P53549 KEL1YHR158C 3495 nt5.77□□□□□ -1.49
RPT4P53549 DUG1YFR044C 1446 nt5.77□□□□□ -1.49
RPT4P53549 SLC1YDL052C 912 nt5.77□□□□□ -1.49
RPT4P53549 NOP16YER002W 696 nt5.77□□□□□ -1.49
RPT4P53549 CBT1YKL208W 816 nt5.77□□□□□ -1.49
RPT4P53549 YNL067W-AYNL067W-A 147 nt5.77□□□□□ -1.49
RPT4P53549 ARO10YDR380W 1908 nt5.76□□□□□ -1.49
RPT4P53549 FUI1YBL042C 1920 nt5.76□□□□□ -1.49
RPT4P53549 ATE1YGL017W 1512 nt5.76□□□□□ -1.49
RPT4P53549 YGL072CYGL072C 360 nt5.76□□□□□ -1.49
RPT4P53549 PXR1YGR280C 816 nt5.76□□□□□ -1.49
RPT4P53549 DOA1YKL213C 2148 nt5.76□□□□□ -1.49
RPT4P53549 YPL191CYPL191C 1083 nt5.76□□□□□ -1.49
RPT4P53549 PDB1YBR221C 1101 nt5.76□□□□□ -1.49
RPT4P53549 SIT1YEL065W 1887 nt5.76□□□□□ -1.49
RPT4P53549 PTK2YJR059W 2457 nt5.75□□□□□ -1.49
RPT4P53549 TOM20YGR082W 552 nt5.75□□□□□ -1.49
RPT4P53549 GEP5YLR091W 882 nt5.75□□□□□ -1.49
RPT4P53549 YPL199CYPL199C 723 nt5.75□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 21.4 ms