Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 tG(GCC)D1tG(GCC)D1 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)D2tG(GCC)D2 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)EtG(GCC)E 71 nt6.07□□□□□ -1.44
PUB1P32588 SUF20tG(GCC)F1 71 nt6.07□□□□□ -1.44
PUB1P32588 PAD1YDR538W 729 nt6.07□□□□□ -1.44 RIP-Chip
PUB1P32588 tG(GCC)F2tG(GCC)F2 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)G1tG(GCC)G1 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)G2tG(GCC)G2 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)J1tG(GCC)J1 71 nt6.07□□□□□ -1.44
PUB1P32588 SUF23tG(GCC)J2 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)MtG(GCC)M 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)O1tG(GCC)O1 71 nt6.07□□□□□ -1.44
PUB1P32588 SUF17tG(GCC)O2 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)P1tG(GCC)P1 71 nt6.07□□□□□ -1.44
PUB1P32588 tG(GCC)P2tG(GCC)P2 71 nt6.07□□□□□ -1.44
PUB1P32588 COS8YHL048W 1146 nt6.07□□□□□ -1.44 RIP-Chip
PUB1P32588 LNP1YHR192W 837 nt6.07□□□□□ -1.44
PUB1P32588 YHR214C-DYHR214C-D 294 nt6.07□□□□□ -1.44
PUB1P32588 HRT3YLR097C 1035 nt6.07□□□□□ -1.44
PUB1P32588 SMD2YLR275W 333 nt6.07□□□□□ -1.44 RIP-Chip
PUB1P32588 YAR069CYAR069C 294 nt6.07□□□□□ -1.44
PUB1P32588 SUB1YMR039C 879 nt6.07□□□□□ -1.44
PUB1P32588 YNL050CYNL050C 813 nt6.07□□□□□ -1.44
PUB1P32588 ELA1YNL230C 1140 nt6.07□□□□□ -1.44 RIP-Chip
PUB1P32588 ZIM17YNL310C 525 nt6.07□□□□□ -1.44
PUB1P32588 MCP1YOR228C 909 nt6.07□□□□□ -1.44
PUB1P32588 YPR109WYPR109W 885 nt6.07□□□□□ -1.44 RIP-Chip
PUB1P32588 MUD1YBR119W 897 nt6.07□□□□□ -1.44
PUB1P32588 YEL023CYEL023C 2049 nt6.06□□□□□ -1.44
PUB1P32588 SKY1YMR216C 2229 nt6.06□□□□□ -1.44 RIP-Chip
PUB1P32588 MIP1YOR330C 3765 nt6.06□□□□□ -1.44 RIP-Chip
PUB1P32588 RMD1YDL001W 1293 nt6.06□□□□□ -1.44
PUB1P32588 BMH1YER177W 804 nt6.06□□□□□ -1.44
PUB1P32588 PDA1YER178W 1263 nt6.06□□□□□ -1.44
PUB1P32588 HAP2YGL237C 798 nt6.06□□□□□ -1.44
PUB1P32588 PRP38YGR075C 729 nt6.06□□□□□ -1.44
PUB1P32588 HGH1YGR187C 1185 nt6.06□□□□□ -1.44 RIP-Chip
PUB1P32588 AIM18YHR198C 966 nt6.06□□□□□ -1.44 RIP-Chip
PUB1P32588 AIM46YHR199C 933 nt6.06□□□□□ -1.44
PUB1P32588 PSF2YJL072C 642 nt6.06□□□□□ -1.44
PUB1P32588 RRT7YLL030C 342 nt6.06□□□□□ -1.44
PUB1P32588 RPL10YLR075W 666 nt6.06□□□□□ -1.44
PUB1P32588 SAS2YMR127C 1017 nt6.06□□□□□ -1.44
PUB1P32588 LTO1YNL260C 597 nt6.06□□□□□ -1.44
PUB1P32588 PUS4YNL292W 1212 nt6.06□□□□□ -1.44
PUB1P32588 TOS6YNL300W 309 nt6.06□□□□□ -1.44 RIP-Chip
PUB1P32588 YBR071WYBR071W 636 nt6.06□□□□□ -1.44 RIP-Chip
PUB1P32588 snR30snR30 606 nt6.06□□□□□ -1.44
PUB1P32588 RRP7YCL031C 894 nt6.06□□□□□ -1.44
PUB1P32588 YCL049CYCL049C 939 nt6.06□□□□□ -1.44
PUB1P32588 CIT3YPR001W 1461 nt6.06□□□□□ -1.44
PUB1P32588 RSA4YCR072C 1548 nt6.05□□□□□ -1.44
PUB1P32588 COM2YER130C 1332 nt6.05□□□□□ -1.44
PUB1P32588 YHR020WYHR020W 2067 nt6.05□□□□□ -1.44
PUB1P32588 RAD59YDL059C 717 nt6.05□□□□□ -1.44
PUB1P32588 CRD1YDL142C 852 nt6.05□□□□□ -1.44
PUB1P32588 MRPS28YDR337W 861 nt6.05□□□□□ -1.44
PUB1P32588 RTR1YER139C 681 nt6.05□□□□□ -1.44 RIP-Chip
PUB1P32588 SPO74YGL170C 1242 nt6.05□□□□□ -1.44
PUB1P32588 YGR114CYGR114C 390 nt6.05□□□□□ -1.44
PUB1P32588 MPD2YOL088C 834 nt6.05□□□□□ -1.44
PUB1P32588 MDY2YOL111C 639 nt6.05□□□□□ -1.44
PUB1P32588 GLO4YOR040W 858 nt6.05□□□□□ -1.44 RIP-Chip
PUB1P32588 SMX3YPR182W 261 nt6.05□□□□□ -1.44 RIP-Chip
PUB1P32588 snR19snR19 568 nt6.05□□□□□ -1.44
PUB1P32588 YHR131CYHR131C 2553 nt6.05□□□□□ -1.44
PUB1P32588 EMP65YER140W 1671 nt6.04□□□□□ -1.44
PUB1P32588 MCH1YDL054C 1461 nt6.04□□□□□ -1.44 RIP-Chip
PUB1P32588 RUD3YOR216C 1455 nt6.04□□□□□ -1.44
PUB1P32588 SNU23YDL098C 585 nt6.04□□□□□ -1.44
PUB1P32588 snR84snR84 550 nt6.04□□□□□ -1.44
PUB1P32588 RPT3YDR394W 1287 nt6.04□□□□□ -1.44
PUB1P32588 YGL102CYGL102C 429 nt6.04□□□□□ -1.44
PUB1P32588 YGL230CYGL230C 444 nt6.04□□□□□ -1.44
PUB1P32588 BI3Q0115 1554 nt6.04□□□□□ -1.44 RIP-Chip
PUB1P32588 PPM2YOL141W 2088 nt6.03□□□□□ -1.44
PUB1P32588 CLN2YPL256C 1638 nt6.03□□□□□ -1.44 RIP-Chip
PUB1P32588 YDR170W-AYDR170W-A 1323 nt6.03□□□□□ -1.44
PUB1P32588 YNL284C-AYNL284C-A 1323 nt6.03□□□□□ -1.44
PUB1P32588 YLL058WYLL058W 1728 nt6.03□□□□□ -1.44
PUB1P32588 PHO3YBR092C 1404 nt6.03□□□□□ -1.44
PUB1P32588 SLU7YDR088C 1149 nt6.03□□□□□ -1.44
PUB1P32588 CPR1YDR155C 489 nt6.03□□□□□ -1.44
PUB1P32588 RNH202YDR279W 1053 nt6.03□□□□□ -1.44 RIP-Chip
PUB1P32588 SUF5tG(CCC)O 72 nt6.03□□□□□ -1.44
PUB1P32588 FPR2YDR519W 408 nt6.03□□□□□ -1.44
PUB1P32588 YPT1YFL038C 621 nt6.03□□□□□ -1.44
PUB1P32588 YLL037WYLL037W 381 nt6.03□□□□□ -1.44
PUB1P32588 NSE1YLR007W 1011 nt6.03□□□□□ -1.44
PUB1P32588 YML119WYML119W 1074 nt6.03□□□□□ -1.44
PUB1P32588 SEN15YMR059W 387 nt6.03□□□□□ -1.44 RIP-Chip
PUB1P32588 YBL068W-AYBL068W-A 237 nt6.03□□□□□ -1.44
PUB1P32588 YBL071CYBL071C 309 nt6.03□□□□□ -1.44
PUB1P32588 YOR111WYOR111W 699 nt6.03□□□□□ -1.44
PUB1P32588 YPL014WYPL014W 1146 nt6.03□□□□□ -1.44
PUB1P32588 YPR012WYPR012W 255 nt6.03□□□□□ -1.44
PUB1P32588 UBA3YPR066W 900 nt6.03□□□□□ -1.44
PUB1P32588 VHS1YDR247W 1386 nt6.03□□□□□ -1.44 RIP-Chip
PUB1P32588 HEM1YDR232W 1647 nt6.03□□□□□ -1.44 RIP-Chip
PUB1P32588 AVT2YEL064C 1443 nt6.02□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 48.1 ms