Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BCKDHAP12694 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.18■■□□□ 1.14
BCKDHAP12694 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
BCKDHAP12694 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.17■■□□□ 1.14
BCKDHAP12694 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BCKDHAP12694 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.17■■□□□ 1.14
BCKDHAP12694 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
BCKDHAP12694 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.17■■□□□ 1.14
BCKDHAP12694 RARRES2P2-201ENST00000394842 485 ntBASIC22.17■■□□□ 1.14
BCKDHAP12694 DUX4L9-201ENST00000449051 1259 ntBASIC22.17■■□□□ 1.14
BCKDHAP12694 AC087393.1-201ENST00000582896 145 ntBASIC22.17■■□□□ 1.14
BCKDHAP12694 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.17■■□□□ 1.14
BCKDHAP12694 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BCKDHAP12694 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BCKDHAP12694 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BCKDHAP12694 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BCKDHAP12694 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BCKDHAP12694 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
BCKDHAP12694 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
BCKDHAP12694 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.16■■□□□ 1.14
BCKDHAP12694 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BCKDHAP12694 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.15■■□□□ 1.14
BCKDHAP12694 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
BCKDHAP12694 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BCKDHAP12694 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.15■■□□□ 1.14
BCKDHAP12694 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BCKDHAP12694 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.15■■□□□ 1.14
BCKDHAP12694 MIR6765-201ENST00000614092 87 ntBASIC22.15■■□□□ 1.14
BCKDHAP12694 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
BCKDHAP12694 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
BCKDHAP12694 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
BCKDHAP12694 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
BCKDHAP12694 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
BCKDHAP12694 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
BCKDHAP12694 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.14■■□□□ 1.14
BCKDHAP12694 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
BCKDHAP12694 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BCKDHAP12694 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
BCKDHAP12694 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BCKDHAP12694 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
BCKDHAP12694 AC090877.2-201ENST00000558441 1738 ntBASIC22.14■■□□□ 1.13
BCKDHAP12694 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.14■■□□□ 1.13
BCKDHAP12694 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
BCKDHAP12694 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.13■■□□□ 1.13
BCKDHAP12694 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
BCKDHAP12694 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
BCKDHAP12694 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.13■■□□□ 1.13
BCKDHAP12694 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.13■■□□□ 1.13
BCKDHAP12694 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BCKDHAP12694 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BCKDHAP12694 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
BCKDHAP12694 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.12■■□□□ 1.13
BCKDHAP12694 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.12■■□□□ 1.13
BCKDHAP12694 HSD17B1P1-201ENST00000590052 955 ntBASIC22.12■■□□□ 1.13
BCKDHAP12694 U85056.1-201ENST00000616429 682 ntBASIC22.12■■□□□ 1.13
BCKDHAP12694 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.12■■□□□ 1.13
BCKDHAP12694 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
BCKDHAP12694 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.11■■□□□ 1.13
BCKDHAP12694 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BCKDHAP12694 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.11■■□□□ 1.13
BCKDHAP12694 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCKDHAP12694 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCKDHAP12694 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.11■■□□□ 1.13
BCKDHAP12694 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
BCKDHAP12694 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCKDHAP12694 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.11■■□□□ 1.13
BCKDHAP12694 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCKDHAP12694 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.11■■□□□ 1.13
BCKDHAP12694 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCKDHAP12694 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.1■■□□□ 1.13
BCKDHAP12694 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCKDHAP12694 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCKDHAP12694 AL592295.1-201ENST00000400984 884 ntBASIC22.1■■□□□ 1.13
BCKDHAP12694 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCKDHAP12694 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
BCKDHAP12694 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
BCKDHAP12694 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCKDHAP12694 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCKDHAP12694 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
BCKDHAP12694 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.09■■□□□ 1.13
BCKDHAP12694 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
BCKDHAP12694 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCKDHAP12694 DUSP8P5-201ENST00000422884 1815 ntBASIC22.08■■□□□ 1.13
BCKDHAP12694 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms