Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
THBS1P07996 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
THBS1P07996 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.37■■□□□ 1.01
THBS1P07996 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
THBS1P07996 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
THBS1P07996 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
THBS1P07996 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.36■■□□□ 1.01
THBS1P07996 AC019171.1-201ENST00000601251 1056 ntBASIC21.36■■□□□ 1.01
THBS1P07996 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
THBS1P07996 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
THBS1P07996 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
THBS1P07996 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
THBS1P07996 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
THBS1P07996 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.35■■□□□ 1.01
THBS1P07996 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
THBS1P07996 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
THBS1P07996 AL033527.3-201ENST00000566366 1196 ntBASIC21.35■■□□□ 1.01
THBS1P07996 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
THBS1P07996 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
THBS1P07996 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
THBS1P07996 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.35■■□□□ 1.01
THBS1P07996 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
THBS1P07996 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
THBS1P07996 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.34■■□□□ 1.01
THBS1P07996 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
THBS1P07996 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
THBS1P07996 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
THBS1P07996 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
THBS1P07996 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
THBS1P07996 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
THBS1P07996 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.33■■□□□ 1.01
THBS1P07996 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
THBS1P07996 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
THBS1P07996 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
THBS1P07996 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.32■■□□□ 1
THBS1P07996 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.32■■□□□ 1
THBS1P07996 AL161729.1-201ENST00000604104 1402 ntBASIC21.32■■□□□ 1
THBS1P07996 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.32■■□□□ 1
THBS1P07996 AC022616.5-201ENST00000518796 181 ntBASIC21.32■■□□□ 1
THBS1P07996 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.32■■□□□ 1
THBS1P07996 AC011551.1-201ENST00000614101 683 ntBASIC21.32■■□□□ 1
THBS1P07996 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
THBS1P07996 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
THBS1P07996 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.31■■□□□ 1
THBS1P07996 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
THBS1P07996 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
THBS1P07996 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
THBS1P07996 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
THBS1P07996 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
THBS1P07996 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
THBS1P07996 AC139795.1-202ENST00000500444 432 ntBASIC21.31■■□□□ 1
THBS1P07996 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.31■■□□□ 1
THBS1P07996 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.31■■□□□ 1
THBS1P07996 ABCB10P4-201ENST00000566803 2184 ntBASIC21.3■■□□□ 1
THBS1P07996 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
THBS1P07996 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
THBS1P07996 TSPY13P-201ENST00000338964 914 ntBASIC21.3■■□□□ 1
THBS1P07996 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
THBS1P07996 AC004987.1-201ENST00000428627 508 ntBASIC21.3■■□□□ 1
THBS1P07996 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.3■■□□□ 1
THBS1P07996 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
THBS1P07996 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.3■■□□□ 1
THBS1P07996 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
THBS1P07996 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
THBS1P07996 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.29■■□□□ 1
THBS1P07996 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
THBS1P07996 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
THBS1P07996 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.29■■□□□ 1
THBS1P07996 ATP5G2P3-201ENST00000429083 425 ntBASIC21.29■■□□□ 1
THBS1P07996 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
THBS1P07996 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
THBS1P07996 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
THBS1P07996 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
THBS1P07996 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.28■■□□□ 1
THBS1P07996 DUX4L18-201ENST00000553347 1267 ntBASIC21.28■■□□□ 1
THBS1P07996 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
THBS1P07996 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
THBS1P07996 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.28■■□□□ 1
THBS1P07996 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
THBS1P07996 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
THBS1P07996 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.27■■□□□ 1
THBS1P07996 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
THBS1P07996 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
THBS1P07996 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
THBS1P07996 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms