Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC233723.2-201ENST00000623798 2106 ntBASIC17.5■□□□□ 0.39
LTAP01374 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LTAP01374 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.49■□□□□ 0.39
LTAP01374 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LTAP01374 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LTAP01374 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.49■□□□□ 0.39
LTAP01374 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.49■□□□□ 0.39
LTAP01374 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.49■□□□□ 0.39
LTAP01374 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LTAP01374 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LTAP01374 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LTAP01374 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LTAP01374 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LTAP01374 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LTAP01374 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LTAP01374 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.47■□□□□ 0.39
LTAP01374 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.47■□□□□ 0.39
LTAP01374 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.47■□□□□ 0.39
LTAP01374 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LTAP01374 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
LTAP01374 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.46■□□□□ 0.39
LTAP01374 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LTAP01374 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.46■□□□□ 0.38
LTAP01374 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.45■□□□□ 0.38
LTAP01374 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LTAP01374 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LTAP01374 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LTAP01374 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LTAP01374 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LTAP01374 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LTAP01374 MIR3960-201ENST00000583311 91 ntBASIC17.44■□□□□ 0.38
LTAP01374 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LTAP01374 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LTAP01374 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LTAP01374 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LTAP01374 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LTAP01374 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LTAP01374 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.43■□□□□ 0.38
LTAP01374 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.43■□□□□ 0.38
LTAP01374 AC025884.2-201ENST00000553429 711 ntBASIC17.43■□□□□ 0.38
LTAP01374 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.43■□□□□ 0.38
LTAP01374 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LTAP01374 EP400NL-214ENST00000641289 2402 ntBASIC17.42■□□□□ 0.38
LTAP01374 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LTAP01374 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LTAP01374 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LTAP01374 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LTAP01374 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LTAP01374 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LTAP01374 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LTAP01374 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LTAP01374 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LTAP01374 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LTAP01374 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LTAP01374 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.41■□□□□ 0.38
LTAP01374 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LTAP01374 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LTAP01374 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.41■□□□□ 0.38
LTAP01374 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LTAP01374 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LTAP01374 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LTAP01374 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LTAP01374 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
LTAP01374 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LTAP01374 LINC00565-201ENST00000562710 2331 ntBASIC17.4■□□□□ 0.38
LTAP01374 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.4■□□□□ 0.38
LTAP01374 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.4■□□□□ 0.38
LTAP01374 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.4■□□□□ 0.38
LTAP01374 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LTAP01374 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LTAP01374 ANOS2P-203ENST00000472227 1816 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms