Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IDH3BO43837 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IDH3BO43837 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IDH3BO43837 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IDH3BO43837 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.13■□□□□ 0.97
IDH3BO43837 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IDH3BO43837 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IDH3BO43837 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.13■□□□□ 0.97
IDH3BO43837 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IDH3BO43837 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IDH3BO43837 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.12■□□□□ 0.97
IDH3BO43837 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.12■□□□□ 0.97
IDH3BO43837 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.12■□□□□ 0.97
IDH3BO43837 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
IDH3BO43837 RAP2CP1-202ENST00000605179 643 ntBASIC21.12■□□□□ 0.97
IDH3BO43837 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
IDH3BO43837 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IDH3BO43837 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.12■□□□□ 0.97
IDH3BO43837 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IDH3BO43837 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IDH3BO43837 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IDH3BO43837 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
IDH3BO43837 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
IDH3BO43837 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
IDH3BO43837 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
IDH3BO43837 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IDH3BO43837 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IDH3BO43837 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IDH3BO43837 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IDH3BO43837 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IDH3BO43837 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.1■□□□□ 0.97
IDH3BO43837 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IDH3BO43837 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.09■□□□□ 0.97
IDH3BO43837 MIR4449-201ENST00000578365 66 ntBASIC21.09■□□□□ 0.97
IDH3BO43837 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.09■□□□□ 0.97
IDH3BO43837 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
IDH3BO43837 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IDH3BO43837 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IDH3BO43837 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IDH3BO43837 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.08■□□□□ 0.96
IDH3BO43837 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
IDH3BO43837 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.07■□□□□ 0.96
IDH3BO43837 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.07■□□□□ 0.96
IDH3BO43837 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
IDH3BO43837 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.07■□□□□ 0.96
IDH3BO43837 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IDH3BO43837 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
IDH3BO43837 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
IDH3BO43837 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
IDH3BO43837 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.06■□□□□ 0.96
IDH3BO43837 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.06■□□□□ 0.96
IDH3BO43837 AC026202.3-201ENST00000600805 1127 ntBASIC21.06■□□□□ 0.96
IDH3BO43837 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IDH3BO43837 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IDH3BO43837 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IDH3BO43837 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IDH3BO43837 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IDH3BO43837 GPX1-201ENST00000419349 1106 ntBASIC21.05■□□□□ 0.96
IDH3BO43837 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
IDH3BO43837 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
IDH3BO43837 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
IDH3BO43837 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IDH3BO43837 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IDH3BO43837 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IDH3BO43837 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IDH3BO43837 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IDH3BO43837 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.04■□□□□ 0.96
IDH3BO43837 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IDH3BO43837 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IDH3BO43837 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
IDH3BO43837 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
IDH3BO43837 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
IDH3BO43837 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
IDH3BO43837 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
IDH3BO43837 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.03■□□□□ 0.96
IDH3BO43837 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IDH3BO43837 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms