Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TSPY11P-201ENST00000442607 1045 ntBASIC34.77■■■■□ 3.16
HFM1A2PYH4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
HFM1A2PYH4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
HFM1A2PYH4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
HFM1A2PYH4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC34.77■■■■□ 3.16
HFM1A2PYH4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC34.77■■■■□ 3.16
HFM1A2PYH4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
HFM1A2PYH4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
HFM1A2PYH4 AC022211.4-201ENST00000625094 2161 ntBASIC34.76■■■■□ 3.16
HFM1A2PYH4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC34.76■■■■□ 3.16
HFM1A2PYH4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
HFM1A2PYH4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.76■■■■□ 3.16
HFM1A2PYH4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
HFM1A2PYH4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC34.75■■■■□ 3.15
HFM1A2PYH4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
HFM1A2PYH4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC34.75■■■■□ 3.15
HFM1A2PYH4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.75■■■■□ 3.15
HFM1A2PYH4 AC131212.1-201ENST00000613771 668 ntBASIC34.75■■■■□ 3.15
HFM1A2PYH4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC34.75■■■■□ 3.15
HFM1A2PYH4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
HFM1A2PYH4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC34.75■■■■□ 3.15
HFM1A2PYH4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
HFM1A2PYH4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC34.75■■■■□ 3.15
HFM1A2PYH4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
HFM1A2PYH4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
HFM1A2PYH4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
HFM1A2PYH4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC34.73■■■■□ 3.15
HFM1A2PYH4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
HFM1A2PYH4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC34.73■■■■□ 3.15
HFM1A2PYH4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC34.73■■■■□ 3.15
HFM1A2PYH4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC34.73■■■■□ 3.15
HFM1A2PYH4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC34.73■■■■□ 3.15
HFM1A2PYH4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
HFM1A2PYH4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC34.72■■■■□ 3.15
HFM1A2PYH4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
HFM1A2PYH4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
HFM1A2PYH4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
HFM1A2PYH4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
HFM1A2PYH4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC34.72■■■■□ 3.15
HFM1A2PYH4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC34.72■■■■□ 3.15
HFM1A2PYH4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC34.72■■■■□ 3.15
HFM1A2PYH4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
HFM1A2PYH4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
HFM1A2PYH4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
HFM1A2PYH4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.71■■■■□ 3.15
HFM1A2PYH4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
HFM1A2PYH4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC34.71■■■■□ 3.15
HFM1A2PYH4 MTDHP2-201ENST00000601468 714 ntBASIC34.71■■■■□ 3.15
HFM1A2PYH4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
HFM1A2PYH4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
HFM1A2PYH4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC34.7■■■■□ 3.15
HFM1A2PYH4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
HFM1A2PYH4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC34.7■■■■□ 3.15
HFM1A2PYH4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
HFM1A2PYH4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC34.69■■■■□ 3.14
HFM1A2PYH4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
HFM1A2PYH4 AC020928.2-201ENST00000588717 2197 ntBASIC34.69■■■■□ 3.14
HFM1A2PYH4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC34.68■■■■□ 3.14
HFM1A2PYH4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
HFM1A2PYH4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC34.68■■■■□ 3.14
HFM1A2PYH4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.68■■■■□ 3.14
HFM1A2PYH4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC34.68■■■■□ 3.14
HFM1A2PYH4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC34.68■■■■□ 3.14
HFM1A2PYH4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC34.68■■■■□ 3.14
HFM1A2PYH4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
HFM1A2PYH4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC34.67■■■■□ 3.14
HFM1A2PYH4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HFM1A2PYH4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HFM1A2PYH4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC34.67■■■■□ 3.14
HFM1A2PYH4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.67■■■■□ 3.14
HFM1A2PYH4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC34.67■■■■□ 3.14
HFM1A2PYH4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HFM1A2PYH4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
HFM1A2PYH4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HFM1A2PYH4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HFM1A2PYH4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC34.66■■■■□ 3.14
HFM1A2PYH4 AC004448.1-201ENST00000458332 883 ntBASIC34.66■■■■□ 3.14
HFM1A2PYH4 AC010997.5-201ENST00000609182 354 ntBASIC34.66■■■■□ 3.14
HFM1A2PYH4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC34.66■■■■□ 3.14
HFM1A2PYH4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC34.66■■■■□ 3.14
HFM1A2PYH4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC34.65■■■■□ 3.14
HFM1A2PYH4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC34.65■■■■□ 3.14
HFM1A2PYH4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
HFM1A2PYH4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
HFM1A2PYH4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
HFM1A2PYH4 AC142381.3-201ENST00000568208 1670 ntBASIC34.65■■■■□ 3.14
HFM1A2PYH4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
HFM1A2PYH4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.64■■■■□ 3.14
HFM1A2PYH4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
HFM1A2PYH4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
HFM1A2PYH4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC34.64■■■■□ 3.14
HFM1A2PYH4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC34.64■■■■□ 3.14
HFM1A2PYH4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC34.64■■■■□ 3.14
HFM1A2PYH4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
HFM1A2PYH4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
HFM1A2PYH4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
HFM1A2PYH4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
HFM1A2PYH4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
HFM1A2PYH4 AL117332.1-201ENST00000622628 974 ntBASIC34.63■■■■□ 3.13
HFM1A2PYH4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms