Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV3D-20A0A0C4DH25 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IGKV3D-20A0A0C4DH25 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 AC092296.2-201ENST00000589470 999 ntBASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3D-20A0A0C4DH25 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3D-20A0A0C4DH25 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 RP9P-202ENST00000450133 1212 ntBASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3D-20A0A0C4DH25 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 C9orf163-202ENST00000624034 2573 ntBASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.15■□□□□ 0.34
IGKV3D-20A0A0C4DH25 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
IGKV3D-20A0A0C4DH25 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3D-20A0A0C4DH25 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3D-20A0A0C4DH25 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
IGKV3D-20A0A0C4DH25 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3D-20A0A0C4DH25 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3D-20A0A0C4DH25 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3D-20A0A0C4DH25 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 ECEL1P2-201ENST00000461596 1295 ntBASIC17.13■□□□□ 0.33
IGKV3D-20A0A0C4DH25 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms