Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 RAP2CP1-202ENST00000605179 643 ntBASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 ABCB10P4-201ENST00000566803 2184 ntBASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 DUSP8P5-201ENST00000422884 1815 ntBASIC17.19■□□□□ 0.34
TRAV21A0A0B4J279 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV21A0A0B4J279 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV21A0A0B4J279 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 AC026202.3-201ENST00000600805 1127 ntBASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV21A0A0B4J279 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV21A0A0B4J279 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV21A0A0B4J279 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV21A0A0B4J279 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 AC133561.1-201ENST00000568600 2415 ntBASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms